NeMO Identifier: Collection

NeMO ID: nemo:col-d40qmej

  • Collection Name: Chromatin accessibility data from mouse V1
  • Short Name: tasic_ATACseq
  • Programs: biccn

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: house mouse
  • Assays: chromatin
  • Anatomical Regions:
  • Modalities: epigenome
  • Techniques: atac-seq
  • Specimen Type:
  • Keywords: house mouse , ATACseq , epigenome , biccn
  • Contact:
  • Grant Numbers: 1RF1MH121274
  • Funding Agency: NIMH
  • URL Protocol:

Contributors

Name Organization ORCID
Megan Chiang Allen Institute 0000-0002-7306-3016
Bosiljka Tasic Allen Institute 0000-0002-6861-4506
Cindy Van Velthoven Allen Institute 0000-0001-5120-4546

Project(s) this Collection Belongs To

ID Title
nemo:grn-uefbssz Cell class- or type-specific viruses for brain-wide labeling and neural circuit examination

Access Raw Data

Total Files Total Size (GB) Protocol Submission Status
3602 0.00 Browse HTTP Server Ongoing

Access Processed Data

Total Files Total Size (GB) Protocol Submission Status
2 0.00 Browse HTTP Server Ongoing

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473