NeMO Identifier: Collection

NeMO ID: nemo:col-ubg04o1

  • Collection Name: "Single-Cell Sequencing of the Developing Human Brain, 10x v2"
  • Short Name: kriegstein_sc_10xv2
  • Programs: biccn

COLLECTION METADATA

  • Description:

  • Single-cell sequencing of a variety of cortical regions and sub-cortical structures from 20 intact first and second trimester brain samples.

  • Collection Type: Dynamic
  • Taxa: human
  • Assays: transcriptome
  • Anatomical Regions:
  • Modalities: transcriptome
  • Techniques: 10x chromium 3' v2 sequencing
  • Specimen Type:
  • Keywords: human , 10x_v2 , transcriptome , biccn
  • Contact: Neel Parikshak
  • Grant Numbers: 1U01MH114825
  • Funding Agency: NIMH
  • URL Protocol: Protocol

Contributors

Name Organization ORCID
Aparna Bhaduri University of California, San Francisco 0000-0003-4625-6899
Arnold Kriegstein University of California, San Francisco 0000-0001-5742-2990
Neel Parikshak University of California, San Francisco 0000-0003-2027-1871
Carmen Sandoval Espinosa University of California, San Francisco
Li Wang University of California, San Francisco

Project(s) this Collection Belongs To

ID Title
nemo:grn-qwzp05p A Cellular resolution census of the developing human brain

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473