NeMO Identifier: Collection

NeMO ID: nemo:col-z6ym0ii

  • Collection Name: "Multiome ATACseq data from M1, brainstem, cerebellum and hippocampus"
  • Short Name: feng_multiome_ATACseq
  • Programs: biccn

COLLECTION METADATA

  • Description:

  • "10X multiome ATACseq from marmoset M1, brainstem, cerebellum and hippocampus."

  • Collection Type: Dynamic
  • Taxa: white-tufted-ear marmoset
  • Assays: multiome; chromatin
  • Anatomical Regions:
  • Modalities: epigenome
  • Techniques: 10x genomics multiome
  • Specimen Type: cell nucleus
  • Keywords: white-tufted-ear marmoset , 10x_multiome , epigenome , biccn
  • Contact:
  • Grant Numbers: 1U01MH114819
  • Funding Agency: NIMH
  • URL Protocol: Protocol

Contributors

Name Organization ORCID
Guoping Feng McGovern Institute for Brain Research 0000-0002-8021-277X
Melissa Goldman Harvard University
Fenna Krienen Harvard University 0000-0002-1400-6820
Steven McCarroll Harvard University 0000-0002-6954-8184

Project(s) this Collection Belongs To

ID Title
nemo:grn-avkxj1y A Molecular and cellular atlas of the marmoset brain

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473