NeMO Identifier: Collection

NeMO ID: nemo:dat-7qjdj84

  • Collection Name: Enhancer viruses for combinatorial cell-subclass-specific labeling
  • Short Name:
  • Programs: biccn

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: house mouse
  • Assays:
  • Anatomical Regions:
  • Modalities: epigenome
  • Techniques: atac-seq
  • Specimen Type:
  • Keywords: mouse , ATAC-seq , cortex
  • Contact: Bosiljka Tasic
  • Grant Numbers:
  • Funding Agency:
  • URL Protocol:
  • Data Access: open
  • Data License: CC BY 4.0

Data associated with this Publication

DOI Year PubMed ID Journal Vol:Page
DOI PMID: 33789083

Contributors

Name Organization ORCID
Bosiljka Tasic Allen Institute 0000-0002-6861-4506

Project(s) this Collection Belongs To

ID Title
nemo:std-0g9mnpc Chromatin accessibility data from mouse V1

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:dat-q2au481 Enhancer viruses for combinatorial cell-subclass-specific labeling: scATAC data files Tasic_Allen_Enhancer_Viruses_Raw_data_scATAC_SMARTseq
nemo:dat-f2frieo Enhancer viruses for combinatorial cell-subclass-specific labeling: scRNA data files Tasic_Allen_Enhancer_Viruses_Raw_data_scRNA_SMARTseq
nemo:dat-djhoynm Enhancer viruses for combinatorial cell-subclass-specific labeling: Analysis files Tasic_Allen_Enhancer_Viruses_Analysis_scRNA-seq_scATAC-seq

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473