NeMO Identifier: Collection

NeMO ID: nemo:dat-aa0jwmj

  • Collection Name: The molecular cytoarchitecture of the adult mouse brain
  • Short Name:
  • Programs: biccn

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: house mouse
  • Assays:
  • Anatomical Regions:
  • Modalities:
  • Techniques:
  • Specimen Type:
  • Keywords: Whole brain atlas , mouse , Spatial transcriptomics , Disease risk
  • Contact: Evan Macosko
  • Grant Numbers:
  • Funding Agency:
  • URL Protocol:
  • Data Access: open

Contributors

Name Organization ORCID
Evan Macosko Broad Institute 0000-0002-2794-5165

Project(s) this Collection Belongs To

ID Title
nemo:std-a8hnovn Transcriptomic cell types in the mouse brain: 10x nuclei

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:dat-y5zxh0y The molecular cytoarchitecture of the adult mouse brain: Raw_10x data files Langlieb_Macosko_WMB_Atlas_2023_Raw_10x
nemo:dat-jdrb5i6 The molecular cytoarchitecture of the adult mouse brain: Analysis_10x files Langlieb_Macosko_WMB_Atlas_2023_Analysis_10x
nemo:dat-htk6mbs The molecular cytoarchitecture of the adult mouse brain: Raw_Slide-seq data files Langlieb_Macosko_WMB_Atlas_2023_Raw_Slide-seq
nemo:dat-o15rhxy The molecular cytoarchitecture of the adult mouse brain: Analysis_Slide-seq files Langlieb_Macosko_WMB_Atlas_2023_Analysis_Slide-seq

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473