NeMO Identifier: Collection

NeMO ID: nemo:dat-gnot1gb

  • Collection Name: Single Cell Epigenomic Atlas of the Developing Human Cortex
  • Short Name:
  • Programs: biccn

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: human
  • Assays:
  • Anatomical Regions:
  • Modalities: epigenome
  • Techniques: atac-seq
  • Specimen Type:
  • Keywords:
  • Contact: Tomasz Nowakowski
  • Grant Numbers:
  • Funding Agency:
  • URL Protocol:
  • Data Access: restricted
  • Data License: CC BY 4.0

Data associated with this Publication

DOI Year PubMed ID Journal Vol:Page
DOI PMID: 34616060

Contributors

Name Organization ORCID
Tomasz Nowakowski University of California, San Francisco 0000-0003-2345-4964

Project(s) this Collection Belongs To

ID Title
nemo:std-y936g22 Single-Cell ATAC-seq of the Developing Human Brain

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:dat-dgarbc3 Single Cell Epigenomic Atlas of the Developing Human Cortex: Analysis files kriegstein_sc_ATACseq_Analysis
nemo:dat-pi33nqw Single Cell Epigenomic Atlas of the Developing Human Cortex: Raw data files kriegstein_sc_ATACseq_Raw

Documentation


Data Citation:

Dataset: Tomasz Nowakowski, Ryan Ziffra, Seth Ament (2022) Single Cell Epigenomic Atlas of the Developing Human Cortex [Dataset]. Available from https://assets.nemoarchive.org/dat-gnot1gb

NeMO Citation:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473