NeMO Identifier: Collection

NeMO ID: nemo:dat-tfmg0va

  • Collection Name: "Single-cell and single-nucleus RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates, and humans"
  • Short Name:
  • Programs: other

COLLECTION METADATA

  • Description:

  • Collection Type: Static
  • Taxa: human
  • Assays: transcriptome
  • Anatomical Regions:
  • Modalities: transcriptome
  • Techniques: smart-seq v4
  • Specimen Type:
  • Keywords: scRNA-seq , Smart-seq v4 , dLGN
  • Contact: Bosiljka Tasic
  • Grant Numbers:
  • Funding Agency:
  • URL Protocol:
  • Data Access: restricted
  • Data License: Public data available under CC BY 4.0; controlled access data subject to data use certification

Data associated with this Publication

DOI Year PubMed ID Journal Vol:Page
DOI PMID: 34473054

Contributors

Name Organization ORCID
Bosiljka Tasic Allen Institute 0000-0002-6861-4506

Project(s) this Collection Belongs To

ID Title
nemo:std-dh6zqwe "Single-cell RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates and humans"

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:dat-j41xrfj Processed data from RNAseq of dorsal LGN neurons files Bakken_2021_dLGN_CrossSpecies_Rseq_Analysis
nemo:dat-9fbmh99 Controlled access human data from RNAseq of dorsal LGN neurons files Bakken_2021_dLGN_CrossSpecies_Rseq_human
nemo:dat-hhys921 Raw macaque (M. fascicularis) data from RNAseq of dorsal LGN neurons files Bakken_2021_dLGN_CrossSpecies_Rseq_mfasc
nemo:dat-btvmjjk Raw macaque (M. nemestrina) data from RNAseq of dorsal LGN neurons files Bakken_2021_dLGN_CrossSpecies_Rseq_mnem
nemo:dat-8tjvikv Raw mouse data from RNAseq of dorsal LGN neurons files Bakken_2021_dLGN_CrossSpecies_Rseq_mouse

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473