NeMO Identifier: Collection

NeMO ID: nemo:dat-yqebkr6

  • Collection Name: A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain: Analysis
  • Short Name: Zeng_transcriptome_Allen_10x_cells_wholebrain_2023_Analysis
  • Programs:

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: house mouse
  • Assays:
  • Anatomical Regions:
  • Modalities:
  • Techniques:
  • Specimen Type:
  • Keywords: whole brain , single cell RNA-Seq , transcriptome , mouse
  • Contact: Zizhen Yao , Hongkui Zeng
  • Grant Numbers:
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  • URL Protocol:
  • Data Access: open

Contributors

Name Organization ORCID
Zizhen Yao Allen Institute 0000-0002-9361-5607
Hongkui Zeng Allen Institute 0000-0002-0326-5878

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:dat-qg7n1b0 A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain files

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473