NeMO Identifier: Collection

NeMO ID: nemo:dat-bej4ymm

  • Collection Name: Comprehensive single-cell analysis of chromatin accessibility in the adult mouse brain
  • Short Name:
  • Programs:

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: house mouse
  • Assays:
  • Anatomical Regions:
  • Modalities:
  • Techniques:
  • Specimen Type:
  • Keywords: snATACseq , whole mouse brain , cis-regulatory DNA elements
  • Contact: Bing Ren
  • Grant Numbers:
  • Funding Agency:
  • URL Protocol:
  • Data Access: open

Contributors

Name Organization ORCID
Bing Ren University of California, San Diego 0000-0002-5435-1127

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:dat-kpm1x42 Comprehensive single-cell analysis of chromatin accessibility in the adult mouse brain: Raw data files ren_snATACseq_WMB_Raw

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473