NeMO Identifier: Collection

NeMO ID: nemo:dat-rg2rc5m

  • Collection Name: Transcriptomic cytoarchitecture reveals principles of human neocortex organization
  • Short Name:
  • Programs:

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: human
  • Assays:
  • Anatomical Regions:
  • Modalities:
  • Techniques:
  • Specimen Type:
  • Keywords: human , cortex , snRNA-seq , SSv4 , cross-areal
  • Contact: Ed Lein
  • Grant Numbers:
  • Funding Agency:
  • URL Protocol:
  • Data Access: restricted

Contributors

Name Organization ORCID
Ed Lein Allen Institute 0000-0001-9012-6552

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:dat-wukizf4 Transcriptomic cytoarchitecture reveals principles of human neocortex organization: Cortex_raw_SSv4 data files Human_Cross_Areal_Cortex_raw_SSv4
nemo:dat-ptqn5sg Transcriptomic cytoarchitecture reveals principles of human neocortex organization: Cortex_analysis_SSv4 files Human_Cross_Areal_Cortex_analysis_SSv4
nemo:dat-dyei78y Transcriptomic cytoarchitecture reveals principles of human neocortex organization: MTG_raw_SSv4 data files Human_Cross_Areal_MTG_raw_SSv4
nemo:dat-87tp6zs Transcriptomic cytoarchitecture reveals principles of human neocortex organization: MTG_analysis_SSv4 files Human_Cross_Areal_MTG_analysis_SSv4
nemo:dat-c0g4u62 Transcriptomic cytoarchitecture reveals principles of human neocortex organization: L5_cortex_raw_10x data files Human_Cross_Areal_L5_cortex_raw_10x
nemo:dat-dnj80h3 Transcriptomic cytoarchitecture reveals principles of human neocortex organization: Raw_10x data files Human_Cross_Areal_raw_10x
nemo:dat-tfy47s9 Transcriptomic cytoarchitecture reveals principles of human neocortex organization: Analysis files Human_Cross_Areal_Analysis

Documentation


Data Citation:

Dataset: Nikolas L. Jorstad, Jennie Close, Nelson Johansen, Anna Marie Yanny, Eliza R. Barkan, Kyle J. Travaglini, Darren Bertagnolli, Jazmin Campos, Tamara Casper, Kirsten Crichton, Nick Dee, Song-Lin Ding, Emily Gelfand, Jeff Goldy, Daniel Hirschstein, Matthew Kroll, Michael Kunst, Kanan Lathia, Brian Long, Naomi Martin, Delissa McMillen, Trangthanh Pham, Christine Rimorin, Augustin Ruiz, Nadiya Shapovalova, Soraya Shehata, Kimberly Siletti, Saroja Somasundaram, Josef Sulc, Michael Tieu, Amy Torkelson, Herman Tung, Katelyn Ward, Edward M. Callaway, Patrick R. Hof, C. Dirk Keene, Boaz P. Levi, Sten Linnarsson, Partha P. Mitra, Kimberly Smith, Rebecca D. Hodge, Trygve E. Bakken, Ed S. Lein (2023) Transcriptomic Cytoarchitecture Reveals Principles of Human Neocortex Organization. [Dataset]. Available from https://assets.nemoarchive.org/dat-rg2rc5m

NeMO Citation:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473