NeMO Identifier: Collection

NeMO ID: nemo:col-2hk6fm0

  • Collection Name: Human and Mammalian Brain Atlas: RNAseq analysis of single nuclei from rhesus macaque brain (10X v3.1 CellPlex) (BICAN-2024-09-RR-SCO MetaSnapshot)
  • Short Name: lein_10Xv3.1-CellPlex_rhesusmonkey_nuclei (BICAN-2024-09-RR-SCO MetaSnapshot)
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: rhesus macaque
  • Assays: transciptome; cellplex_barcode , transciptome; cellplex_RNAseq
  • Anatomical Regions: neocortex (isocortex)
  • Modalities: transcriptome
  • Techniques: 10xV3.1_CellPlex;Barcode , 10xV3.1_CellPlex;GEX
  • Specimen Type:
  • Keywords: BICAN , Rapid Release , 2024
  • Contact:
  • Grant Numbers: UM1MH130981
  • Funding Agency: NIMH
  • URL Protocol: Protocol
  • Data Access: open
  • Data License: CC BY 4.0
  • Submission Status: Ongoing

Project(s) this Collection Belongs To

ID Title
nemo:prj-t8d9ty5 Functionally guided adult whole brain cell atlas in human and NHP

Brain Region(s) of Interest

Name
neocortex (isocortex)

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-jgk1h8n Human and Mammalian Brain Atlas: RNAseq analysis of single nuclei from rhesus macaque brain (10X v3.1 CellPlex) (MetaCumulative) collection lein_10Xv3.1-CellPlex_rhesusmonkey_nuclei (MetaCumulative)

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-irzdben Human and Mammalian Brain Atlas: RNAseq analysis of single nuclei from rhesus macaque brain (10X v3.1 CellPlex) (BICAN-2024-09-RR-SCO Snapshot RNA) files lein_10Xv3.1-CellPlex_rhesusmonkey_nuclei (BICAN-2024-09-RR-SCO Snapshot RNA) ongoing
nemo:col-kdws7vp Human and Mammalian Brain Atlas: RNAseq analysis of single nuclei from rhesus macaque brain (10X v3.1 CellPlex) (BICAN-2024-09-RR-SCO Snapshot Barcode) files lein_10Xv3.1-CellPlex_rhesusmonkey_nuclei (BICAN-2024-09-RR-SCO Snapshot Barcode) ongoing

Documentation


Data Citation:

Dataset: Trygve Bakken, Darren Bertagnolli, Anish Bhaswanth Chakka, Rushil Chakrabarty, Nick Dee, Rebecca Ferrer, Aaron Garcia, Jeff Goldy, Junitta Guzman, Madeleine Hewitt, Daniel Hirschstein, Windy Ho, Rebecca Hodge, Katelyn James, Danielle L. Jones, Lauren Kruse, Boaz P. Levi, Brian Long, Delissa McMillen, Beagan Nguy, Nicholas Peña, Trangthanh Pham, Jessie Puckett, Matthew Schmitz, Stephanie Seeman, Nadiya V. Shapovalova, Kimberly A. Smith, Cassandra Sobieski, Michael Tieu, Amy Torkelson, Jack Waters, Morgan Wirthlin, Hongkui Zeng, Ed Lein (2024) Human and Mammalian Brain Atlas: RNAseq analysis of single nuclei from rhesus macaque brain (10X v3.1 CellPlex) [Dataset]. Available from: https://assets.nemoarchive.org/col-2hk6fm0.