BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_ATACseq__gray_short-tailed_opossum__demultiplexed_fastq__coh-8boto7m__no_restriction

Program
bican
Collection Type
Static

This collection contains gray short-tailed opossum demultiplexed_fastq files from the project HMBA. Files in this collection include 10xMultiome_ATACseq data from nuclei.

Data citation
Dataset: Trygve Bakken, Darren Bertagnolli, Anish Bhaswanth Chakka, Rushil Chakrabarty, Nick Dee, Rebecca Ferrer, Aaron Garcia, Jeff Goldy, Junitta Guzman, Madeleine Hewitt, Daniel Hirschstein, Windy Ho, Rebecca Hodge, Katelyn James, Danielle L. Jones, Lauren Kruse, Boaz P. Levi, Brian Long, Delissa McMillen, Beagan Nguy, Nicholas Peña, Trangthanh Pham, Jessie Puckett, Matthew Schmitz, Stephanie Seeman, Nadiya V. Shapovalova, Kimberly A. Smith, Cassandra Sobieski, Michael Tieu, Amy Torkelson, Jack Waters, Morgan Wirthlin, Hongkui Zeng, Ed Lein (2024) Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from opossum brain [Dataset]. Available from: https://assets.nemoarchive.org/col-zm78c5y.
Funding agency
NIMH
Grant numbers
UM1MH130981
Access
open
License
No license listed

Download URLs

No download URLs listed for this collection.

Anatomical Regions

  • entorhinal cortex
  • primary visual cortex (striate cortex, area V1/17)

Taxa

gray short-tailed opossum

Projects this collection belongs to

  • nemo:prj-t8d9ty5
    Functionally guided adult whole brain cell atlas in human and NHP

Assays, Modalities & Techniques

Assays
multiome; chromatin
Modalities
multimodal
Techniques
10X genomics multiome;atac-seq

Child collections

No child collections listed for BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_ATACseq__gray_short-tailed_opossum__demultiplexed_fastq__coh-8boto7m__no_restriction collection.

Parent collections

  • nemo:col-zm78c5y
    BICAN__MetaSnapshot__2025-08-12__HMBA__aibs__nuclei__10X_genomics_multiome__gray_short-tailed_opossum__demultiplexed_fastq__coh-8boto7m__no_restriction
    collection

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_ATACseq__gray_short-tailed_opossum__demultiplexed_fastq__coh-8boto7m__no_restriction collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources