Developing Mouse Brain Atlas: Multiome analysis of single cells from embryonic and postnatal mouse brain - Arlotta Lab - fastq (BICAN-2026-09-RR-SCO Snapshot ATAC)

Program
bican
Collection Type
Static
Specimen Type
cells
Keywords
Rapid Release 2026

As part of the BRAIN Initiative Cell Atlas Network, single cells from mouse brain were assayed using the 10X Genomics Multiome platform. (BICAN-2026-09-RR-SCO Snapshot ATAC)

Data citation
Dataset (fastq): Daniela Di Bella, Ashwin Shetty, Daniel Gonzalez Bohorquez, Nuria Dominguez Iturza, Michael Borrett, Mayank Ghogale, Sebastian Morales, Federica Mosti, Juliana Brown, Rafaela Sartore, Paola Arlotta. (2026) Developing Mouse Brain Atlas: Multiome analysis of single cells from embryonic and postnatal mouse brain - Arlotta Lab [Dataset - fastq]. Available from: https://assets.nemoarchive.org/nemo:col-1rta9hz
Funding agency
NIMH
Grant numbers
U01MH130962
Access
open
License
CCBY4

Download URLs

  • Download BDBag https://data.nemoarchive.org/bdbags/BICAN/BICAN-2026-09-RR-SCO/col-628r50d__BICAN__Snapshot__2026-09-25__BICAN_Dev_Mouse__harvard_arlotta__cells__10xMultiome_ATACseq__house_mouse__demultiplexed_fastq__open__no_restriction.tgz 32 files 82.13 GB
    Raw BDBag

Anatomical Regions

  • Isocortex
  • Hippocampal formation

Taxa

house mouse

Projects this collection belongs to

  • nemo:prj-ggc1k9k
    Comprehensive single-cell atlas of the developing mouse brain

Assays, Modalities & Techniques

Assays
multiome; chromatin
Modalities
multimodal
Techniques
10X genomics multiome;atac-seq

Child collections

No child collections listed for Developing Mouse Brain Atlas: Multiome analysis of single cells from embryonic and postnatal mouse brain - Arlotta Lab - fastq (BICAN-2026-09-RR-SCO Snapshot ATAC) collection.

Parent collections

  • nemo:col-1rta9hz
    Developmental Multiomics: Single-nucleus multi-omic DNA methylation and transcriptome sequencing (snmCT-seq) from human brain - fastq (BICAN-2026-09-RR-SCO MetaSnapshot)
    collection

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for Developing Mouse Brain Atlas: Multiome analysis of single cells from embryonic and postnatal mouse brain - Arlotta Lab - fastq (BICAN-2026-09-RR-SCO Snapshot ATAC) collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources