bican__BICAN_Mul_PN_Human__ucsd_ren__nuclei__droplet_pairedtag_DNA__human__demultiplexed_fastq__open__no_restriction__2026-08-11

Collection Type
Static
Specimen Type
nuclei

This dataset is generated under the bican program and BICAN_Mul_PN_Human grant by the ucsd_ren lab from human nuclei analyzed using droplet_pairedtag_DNA producing demultiplexed_fastq data.

Data citation
No data citation listed
Funding agency
No funding agency listed
Grant numbers
No grant numbers listed
Access
open
License
No license listed

Download URLs

  • Browse HTTP server https://data.nemoarchive.org/bican/grant/BICAN_Mul_PN_Human/ucsd_ren/multimodal/nuclei/droplet_pairedtag_DNA/human/demultiplexed_fastq 3,552 files 6,828.29 GB
    Raw HTTP

Anatomical Regions

  • laterodorsal portion of STH
  • head of caudate
  • tail of caudate
  • substantia innominata
  • red nucleus
  • body of caudate

Taxa

human

Projects this collection belongs to

No projects listed for bican__BICAN_Mul_PN_Human__ucsd_ren__nuclei__droplet_pairedtag_DNA__human__demultiplexed_fastq__open__no_restriction__2026-08-11 collection.

Assays, Modalities & Techniques

Assays
multiome; chromatin
Modalities
multimodal
Techniques
droplet paired-tag; DNA

Child collections

No child collections listed for bican__BICAN_Mul_PN_Human__ucsd_ren__nuclei__droplet_pairedtag_DNA__human__demultiplexed_fastq__open__no_restriction__2026-08-11 collection.

Parent collections

  • nemo:dat-rrstbt3
    Single-Cell Analysis of Chromatin State and Transcriptome in Human Basal Ganglia
    files

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

Show 72 more contributors
  • Jonathan A Rink No affiliation listed
  • Cindy Tatiana Báez-Becerra No affiliation listed
  • Audrey Lie No affiliation listed
  • Hannah S Indralingam No affiliation listed
  • Keyi Dong No affiliation listed
  • Timothy Loe No affiliation listed
  • Zhaoning Wang University of California, San Diego 0000-0002-0290-4746
  • Songpeng Zu No affiliation listed
  • Joseph Colin Kern No affiliation listed
  • Zoey Zhao No affiliation listed
  • Eric Boone No affiliation listed
  • Jesus Fluores No affiliation listed
  • Alexander Monell No affiliation listed
  • Jacquelin Olness No affiliation listed
  • Chenxu Zhu No affiliation listed
  • Xiaomeng Gao No affiliation listed
  • Ariana S Barcoma No affiliation listed
  • Jackson K Willier No affiliation listed
  • Kyle W Knutson No affiliation listed
  • Kaitlyn G Russo No affiliation listed
  • Jiayi Liu No affiliation listed
  • Silvia Cho No affiliation listed
  • Jessica Arzavala No affiliation listed
  • Carissa K Young No affiliation listed
  • Yareli Sanchez No affiliation listed
  • Aleksandra Bikkina No affiliation listed
  • Carolyn O’Connor No affiliation listed
  • Michelle Liem No affiliation listed
  • Mikayla V Marrin No affiliation listed
  • Cynthia Rose No affiliation listed
  • Shane N Alt No affiliation listed
  • Natalie Schenker-Ahmed No affiliation listed
  • Wubin Ding No affiliation listed 0000-0002-5355-7561
  • Amit Klein No affiliation listed 0000-0002-5898-6592
  • Anna Bartlett No affiliation listed
  • Rosa Gomez Castanon No affiliation listed
  • Joseph Nery Salk Institute for Biological Studies 0000-0003-0153-5659
  • Wei Tian Salk Institute for Biological Studies
  • Alaina Petrella No affiliation listed
  • Jordan Altshul No affiliation listed
  • Derek Chan No affiliation listed
  • Andrea Saldana Acerbo No affiliation listed
  • Chumo Chen No affiliation listed
  • Emma Osgood No affiliation listed
  • William Owens No affiliation listed
  • Jammy Luo No affiliation listed
  • Eshaan Soma No affiliation listed
  • Manya Jain No affiliation listed
  • Sarah Velazquez No affiliation listed
  • Cesar Barragan No affiliation listed
  • Manoj Hariharan No affiliation listed
  • Jillian Berry No affiliation listed
  • Nelson Johansen No affiliation listed
  • Yuanyuan Fu Allen Institute, Brain Science 0000-0001-5934-6573
  • Trygve Bakken Allen Institute 0000-0003-3373-7386
  • Rebecca D Hodge No affiliation listed
  • Anna Marie Yanny No affiliation listed
  • Julie Nyhus No affiliation listed
  • Nicholas Dee Allen Institute, Brain Science 0000-0002-2831-9254
  • Tamara Casper Allen Institute, Brain Science 0000-0003-1638-3651
  • Nadiya Shapovalova No affiliation listed
  • Daniel Hirschstein No affiliation listed
  • Boaz Levi No affiliation listed
  • C Dirk Keene No affiliation listed
  • Ed S Lein Allen Institute 0000-0001-9012-6552
  • Daofeng Li No affiliation listed
  • Quan Zhu No affiliation listed
  • Ting Wang Washington University School of Medicine 0000-0002-6800-242X
  • Xiangmin Xu University of California, Irvine 0000-0002-5828-1533
  • Joseph R Ecker Salk Institute for Biological Studies 0000-0001-5799-5895
  • Margarita Behrens Salk Institute 0000-0002-7168-8186
  • Bing Ren University of California, San Diego 0000-0002-5435-1127

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources