Human and Mammalian Brain Atlas: RNAseq analysis of single nuclei from rhesus macaque brain (10X v3.1 HT CellPlex) - fastq (BICAN-2026-09-RR-SCO Snapshot Barcode)

Program
bican
Collection Type
Static
Specimen Type
nuclei
Keywords
Rapid Release 2026

As part of the BRAIN Initiative Cell Atlas Network, single nuclei from rhesus monkey were assayed using 10X chromium 3' v3.1 HT CellPlex sequencing - fastq (BICAN-2026-09-RR-SCO Snapshot Barcode)

Data citation
Dataset: Trygve Bakken, Darren Bertagnolli, Anish Bhaswanth Chakka, Rushil Chakrabarty, Nick Dee, Rebecca Ferrer, Aaron Garcia, Jeff Goldy, Junitta Guzman, Madeleine Hewitt, Daniel Hirschstein, Windy Ho, Rebecca Hodge, Katelyn James, Danielle L. Jones, Lauren Kruse, Boaz P. Levi, Brian Long, Delissa McMillen, Beagan Nguy, Nicholas Peña, Trangthanh Pham, Jessie Puckett, Matthew Schmitz, Stephanie Seeman, Nadiya V. Shapovalova, Kimberly A. Smith, Cassandra Sobieski, Michael Tieu, Amy Torkelson, Jack Waters, Morgan Wirthlin, Hongkui Zeng, Ed Lein (2024) Human and Mammalian Brain Atlas: RNAseq analysis of single nuclei from rhesus macaque brain (10X v3.1 HT CellPlex) [Dataset]. Available from: https://assets.nemoarchive.org/nemo:col-v2r75z6
Funding agency
NIMH
Grant numbers
UM1MH130981
Access
open
License
CCBY4

Download URLs

  • Download BDBag https://data.nemoarchive.org/bdbags/BICAN/BICAN-2026-09-RR-SCO/col-ec6wdgc__BICAN__Snapshot__2026-09-25__HMBA__aibs__nuclei__10xV3.1_HT_CellPlex_Barcode__rhesus_macaque__demultiplexed_fastq__open__no_restriction.tgz 1,216 files 3,240.31 GB
    Raw BDBag

Anatomical Regions

  • subgenual (subcallosal) division of MFC (area 25)
  • entorhinal cortex
  • medial (posterior) entorhinal cortex
  • lateral (anterior) entorhinal cortex
  • ventral division of MFC (area 24)

Taxa

rhesus macaque

Projects this collection belongs to

  • nemo:prj-t8d9ty5
    Functionally guided adult whole brain cell atlas in human and NHP

Assays, Modalities & Techniques

Assays
HT; cellplex_barcode
Modalities
transcriptome
Techniques
10xV3.1_HT_CellPlex;Barcode

Child collections

No child collections listed for Human and Mammalian Brain Atlas: RNAseq analysis of single nuclei from rhesus macaque brain (10X v3.1 HT CellPlex) - fastq (BICAN-2026-09-RR-SCO Snapshot Barcode) collection.

Parent collections

  • nemo:col-v2r75z6
    Human and Mammalian Brain Atlas: RNAseq analysis of single nuclei from rhesus macaque brain (10X v3.1 HT CellPlex) - fastq (BICAN-2026-09-RR-SCO MetaSnapshot)
    collection

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for Human and Mammalian Brain Atlas: RNAseq analysis of single nuclei from rhesus macaque brain (10X v3.1 HT CellPlex) - fastq (BICAN-2026-09-RR-SCO Snapshot Barcode) collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources