bican__BICAN_Mul_PN_Human__salk_ecker__nuclei__m3C-seq__human__demultiplexed_fastq__open__no_restriction__2026-08-11

Collection Type
Static
Specimen Type
nuclei

This dataset is generated under the bican program and BICAN_Mul_PN_Human grant by the salk_ecker lab from human nuclei analyzed using m3C-seq producing demultiplexed_fastq data.

Data citation
No data citation listed
Funding agency
No funding agency listed
Grant numbers
No grant numbers listed
Access
open
License
No license listed

Download URLs

  • Browse HTTP server https://data.nemoarchive.org/bican/grant/BICAN_Mul_PN_Human/salk_ecker/epigenome/nuclei/m3C_seq/human/demultiplexed_fastq 16,800 files 70,920.73 GB
    Raw HTTP

Anatomical Regions

  • laterodorsal portion of STH
  • head of caudate
  • tail of caudate
  • substantia innominata
  • red nucleus
  • body of caudate

Taxa

human

Projects this collection belongs to

No projects listed for bican__BICAN_Mul_PN_Human__salk_ecker__nuclei__m3C-seq__human__demultiplexed_fastq__open__no_restriction__2026-08-11 collection.

Assays, Modalities & Techniques

Assays
methylation
Modalities
epigenome
Techniques
m3c-seq

Child collections

No child collections listed for bican__BICAN_Mul_PN_Human__salk_ecker__nuclei__m3C-seq__human__demultiplexed_fastq__open__no_restriction__2026-08-11 collection.

Parent collections

  • nemo:dat-aw6czix
    A Multimodal Single-Cell Epigenomic and 3D Genome Atlas of the Human Basal Ganglia
    files

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

Show 52 more contributors
  • Cindy Tatiana Báez-Becerra No affiliation listed
  • Jonathan A Rink No affiliation listed
  • Anna Bartlett No affiliation listed
  • Qiurui Zeng Salk Institute for Biological Studies
  • Ruoxuan Wang No affiliation listed
  • Rosa Gomez Castanon No affiliation listed
  • Joseph Nery Salk Institute for Biological Studies 0000-0003-0153-5659
  • Emma Osgood No affiliation listed
  • William Owens No affiliation listed
  • Alaina Petrella No affiliation listed
  • Chumo Chen No affiliation listed
  • Andrea Saldana Acerbo No affiliation listed
  • Ariana S Barcoma No affiliation listed
  • Jiayi Liu No affiliation listed
  • Kaitlyn G Russo No affiliation listed
  • Kyle W Knutson No affiliation listed
  • Carissa K Young No affiliation listed
  • Jackson K Willier No affiliation listed
  • Cesar Barragan No affiliation listed
  • Jessica Arzavala No affiliation listed
  • Silvia Cho No affiliation listed
  • Jordan Altshul No affiliation listed
  • Derek Chan No affiliation listed
  • Eshaan Soma No affiliation listed
  • Jammy Luo No affiliation listed
  • Manya Jain No affiliation listed
  • Sarah Velazquez No affiliation listed
  • Natalie Schenker-Ahmed No affiliation listed
  • Guha V Sundaram No affiliation listed
  • Austin C Manning No affiliation listed
  • Yareli Sanchez No affiliation listed
  • Aleksandra Bikkina No affiliation listed
  • Shuai Fu No affiliation listed
  • Wei Tian Salk Institute for Biological Studies
  • Huaming Chen Salk Institute for Biological Studies
  • Yueyue Wu No affiliation listed
  • Manoj Hariharan No affiliation listed
  • Carolyn O’Connor No affiliation listed
  • Michelle Liem No affiliation listed
  • Mikayla V Marrin No affiliation listed
  • Cynthia Rose No affiliation listed
  • Shane N Alt No affiliation listed
  • Jillian Berry No affiliation listed
  • Wenjin Zhang No affiliation listed
  • Quan Zhu No affiliation listed
  • Rebecca D Hodge No affiliation listed
  • Trygve Bakken Allen Institute 0000-0003-3373-7386
  • Ed S Lein Allen Institute 0000-0001-9012-6552
  • Daofeng Li No affiliation listed
  • Ting Wang Washington University School of Medicine 0000-0002-6800-242X
  • Xiangmin Xu University of California, Irvine 0000-0002-5828-1533
  • Bing Ren University of California, San Diego 0000-0002-5435-1127

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources