NeMO Identifier: Collection

NeMO ID: nemo:dat-aw6czix

  • Collection Name: A Multimodal Single-Cell Epigenomic and 3D Genome Atlas of the Human Basal Ganglia
  • Short Name:
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: human
  • Assays: whole genome , spatial transcriptome , chromatin , methylation
  • Anatomical Regions: basal ganglia
  • Modalities: genome , epigenome
  • Techniques: m3c-seq , whole genome sequencing
  • Specimen Type:
  • Keywords: Basal Ganglia , DNA methylation , Chromatin interaction , 3D genome , Human Brain , snm3C-seq
  • Contact:
  • Grant Numbers: UM1MH130994
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open
  • Data License: CC BY 4.0

Data associated with this Publication

DOI Year PubMed ID Journal Vol:Page

Contributors

Name Organization ORCID
Joseph R Ecker Salk Institute for Biological Studies 0000-0001-5799-5895
Maria Margarita Behrens 0000-0002-7168-8186
Wubin Ding 0000-0002-5355-7561
Amit Klein 0000-0002-5898-6592
Cindy Tatiana Báez-Becerra
Jonathan A Rink
Anna Bartlett
Qiurui Zeng Salk Institute for Biological Studies
Ruoxuan Wang
Rosa Gomez Castanon
Joseph Nery Salk Institute for Biological Studies 0000-0003-0153-5659
Emma Osgood
William Owens
Alaina Petrella
Chumo Chen
Andrea Saldana Acerbo
Ariana S Barcoma
Jiayi Liu
Kaitlyn G Russo
Kyle W Knutson
Carissa K Young
Jackson K Willier
Cesar Barragan
Jessica Arzavala
Silvia Cho
Jordan Altshul
Derek Chan
Eshaan Soma
Jammy Luo
Manya Jain
Sarah Velazquez
Natalie Schenker-Ahmed
Guha V Sundaram
Austin C Manning
Yareli Sanchez
Aleksandra Bikkina
Shuai Fu
Wei Tian Salk Institute for Biological Studies
Huaming Chen Salk Institute for Biological Studies
Yueyue Wu
Manoj Hariharan
Carolyn O’Connor
Michelle Liem
Mikayla V Marrin
Cynthia Rose
Shane N Alt
Jillian Berry
Wenjin Zhang
Quan Zhu
Rebecca D Hodge
Trygve Bakken Allen Institute 0000-0003-3373-7386
Ed S Lein Allen Institute 0000-0001-9012-6552
Daofeng Li
Ting Wang Washington University School of Medicine 0000-0002-6800-242X
Xiangmin Xu University of California, Irvine 0000-0002-5828-1533
Bing Ren University of California, San Diego 0000-0002-5435-1127

Project(s) this Collection Belongs To

ID Title
nemo:prj-butzji4 Center for Multiomic Human Brain Cell Atlas

Brain Region(s) of Interest

Name
basal ganglia

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-n6b0x7w BICAN Basal Ganglia package collection BICAN Basal Ganglia package ongoing

Documentation