NeMO Identifier: Collection

NeMO ID: nemo:col-jkfop2g

  • Collection Name: BICAN__Cumulative__2025-08-12__BICAN_Dev_Mouse__aibs__cells__10xV3.1_HT__house_mouse__demultiplexed_fastq__coh-8ex6kd4__no_restriction
  • Short Name:
  • Programs: bican

COLLECTION METADATA

  • Description:

  • This is a BICAN Cumulative collection that was created as part of the Rapid Release 2025-08-12

  • Collection Type: Dynamic
  • Taxa: house mouse
  • Assays: transcriptome , HT; transcriptome
  • Anatomical Regions: Hindbrain , Hippocampal formation , Cerebral nuclei , Olfactory areas , Isocortex , Cerebellum , Hypothalamus , Midbrain , Thalamus , Cortical subplate
  • Modalities: transcriptome
  • Techniques: 10xV3.1_HT
  • Specimen Type:
  • Keywords:
  • Contact:
  • Grant Numbers: U01MH130962
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open

Project(s) this Collection Belongs To

ID Title
nemo:prj-ggc1k9k Comprehensive single-cell atlas of the developing mouse brain

Brain Region(s) of Interest

Name
Hindbrain
Hippocampal formation
Cerebral nuclei
Olfactory areas
Isocortex
Cerebellum
Hypothalamus
Midbrain
Thalamus
Cortical subplate

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-68kzrvo BICAN__Snapshot__2025-08-12__BICAN_Dev_Mouse__aibs__cells__10xV3.1_HT__house_mouse__demultiplexed_fastq__coh-8ex6kd4__no_restriction files BICAN__Snapshot__2025-08-12__BICAN_Dev_Mouse__aibs__cells__10xV3.1_HT__house_mouse__demultiplexed_fastq__coh-8ex6kd4__no_restriction

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473