NeMO Identifier: Collection

NeMO ID: nemo:col-kwriiu8

  • Collection Name: Transcriptomic cell types in the mouse brain: 10xv3 nuclei
  • Short Name: zeng_sn_10xv3
  • Programs: biccn

COLLECTION METADATA

  • Description:

  • Single nucleus characterization in mouse brain using 10x 3' v3 sequencing.

  • Collection Type: Dynamic
  • Taxa: house mouse
  • Assays: transcriptome
  • Anatomical Regions:
  • Modalities: transcriptome
  • Techniques: 10x chromium 3' v3 sequencing
  • Specimen Type:
  • Keywords: house mouse , 10x_v3 , transcriptome , biccn
  • Contact:
  • Grant Numbers: 1U19MH114830
  • Funding Agency: NIMH
  • URL Protocol:

Contributors

Name Organization ORCID
Megan Chiang Allen Institute 0000-0002-7306-3016
Tim Dolbeare Allen Institute
Bosiljka Tasic Allen Institute 0000-0002-6861-4506
Cindy Van Velthoven Allen Institute 0000-0001-5120-4546
Hongkui Zeng Allen Institute 0000-0002-0326-5878

Project(s) this Collection Belongs To

ID Title
nemo:grn-eyks011 A comprehensive whole-brain atlas of cell types in the mouse

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473