NeMO ID: nemo:col-ond7r4e

Collection Name: Transcriptomic characterization of cell types in human brain: 10x nuclei v3
Short Name: lein_sn_10xv3
Programs: biccn

COLLECTION METADATA

Description:
Broad transcriptomic survey of ~100 regions of adult postmortem human brain and spinal cord.
Collection Type: Dynamic
Taxa: human
Assays: transcriptome
Anatomical Regions:
Modalities: transcriptome
Techniques: 10x chromium 3' v3 sequencing
Specimen Type: cell nucleus
Keywords: human , 10x_v3 , transcriptome , biccn

Contact:
Grant Numbers: 1U01MH114812
Funding Agency: NIMH
URL Protocol: Protocol

Data Access: open
Data License: Public data available under CC BY 4.0; controlled access data subject to data use certification

Submission Status: Ongoing

View at Brain Knowledge Platform (BKP) Data Catalog

Contributors

Name	Organization	ORCID
Trygve Bakken	Allen Institute	0000-0003-3373-7386
Ed Lein	Allen Institute	0000-0001-9012-6552
Sten Linnarsson	Karolinska Institute	0000-0002-3491-3444

Project(s) this Collection Belongs To

ID	Title
nemo:grn-eg23ca0	A multimodal atlas of human brain cell types

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473