NeMO Identifier: Collection

NeMO ID: nemo:col-xttu23v

  • Collection Name: Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from rat brain (MetaCumulative)
  • Short Name: lein_10XMultiome_rat_nuclei (MetaCumulative)
  • Programs: bican

COLLECTION METADATA

  • Description:

  • As part of the BRAIN Initiative Cell Atlas Network, single nuclei from Norway rat were assayed by 10X Genomics Multiome platform.

  • Collection Type: Dynamic
  • Taxa: Norway rat
  • Assays: multiome; chromatin , multiome; transcriptome
  • Anatomical Regions: entorhinal cortex , primary visual cortex (striate cortex, area V1/17)
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords: BICAN , Rapid Release
  • Contact:
  • Grant Numbers: UM1MH130981
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open

Project(s) this Collection Belongs To

ID Title
nemo:prj-t8d9ty5 Functionally guided adult whole brain cell atlas in human and NHP

Brain Region(s) of Interest

Name
entorhinal cortex
primary visual cortex (striate cortex, area V1/17)

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-9g1qh61 Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from rat brain (BICAN-2024-09-RR-SCO MetaSnapshot) files lein_10XMultiome_rat_nuclei (BICAN-2024-09-RR-SCO MetaSnapshot) ongoing
nemo:col-gmx43jp Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from rat brain (BICAN-2026-01-RR-SCO MetaSnapshot) collection lein_10XMultiome_rat_nuclei (BICAN-2026-01-RR-SCO MetaSnapshot)

Documentation