NeMO Identifier: Collection

NeMO ID: nemo:dat-4wbh9vd

  • Collection Name: Multiscale Spatial Transcriptomic Atlas of Human Basal Ganglia Cell-Type and Cellular Community Organization
  • Short Name:
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: human
  • Assays: spatial transcriptome
  • Anatomical Regions: basal ganglia
  • Modalities: multimodal
  • Techniques: Stereo-seq
  • Specimen Type:
  • Keywords: Stereo-seq , Spatial transcriptomics , Human Basal Ganglia , single-cell atlas , transcript topography , cross-species comparison
  • Contact: Bereket Tesfay Berackey , Zhiqun Tan , Xiangmin Xu
  • Grant Numbers: UM1MH130994
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open

Contributors

Name Organization ORCID
Bereket Tesfay Berackey 0009-0002-1456-0714
Zhiqun Tan 0000-0002-2235-4577
Ginny Wu
Sujan C Das
Ren Li
Benjamin Esser
Qiao Ye
Mahsa Nafisi
Samuel S Park
Pedro Adolfo Sequeira Mendieta
Jillian Berry
Firoza Mamdani
Quan Zhu
Todd C Holmes
Daofeng Li
Ting Wang Washington University School of Medicine 0000-0002-6800-242X
Maria Margarita Behrens 0000-0002-7168-8186
Bing Ren University of California, San Diego 0000-0002-5435-1127
Joseph R Ecker Salk Institute for Biological Studies 0000-0001-5799-5895
Xiangmin Xu University of California, Irvine 0000-0002-5828-1533
Bogdan Bintu

Project(s) this Collection Belongs To

ID Title
nemo:prj-butzji4 Center for Multiomic Human Brain Cell Atlas

Brain Region(s) of Interest

Name
basal ganglia

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-n6b0x7w BICAN Basal Ganglia package collection BICAN Basal Ganglia package ongoing

Documentation