NeMO Identifier: Collection

NeMO ID: nemo:dat-htzat9t

  • Collection Name: Progenitor Cell Diversity in the Developing Human Ganglionic Eminences
  • Short Name:
  • Programs: bican , other

COLLECTION METADATA

  • Description:

  • Collection Type: Dynamic
  • Taxa: human
  • Assays: spatial transcriptome , multiome; chromatin , multiome; transcriptome
  • Anatomical Regions: ganglionic eminence (VZ in basal nuclei)
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords: Interneurons development , Single nuclei sequencing , ganglionic eminences
  • Contact: Mengyi Song
  • Grant Numbers: UM1MH130991, R34NS137344
  • Funding Agency:
  • URL Protocol:
  • Data Access: open
  • Data License: CC BY 4.0

Data associated with this Publication

DOI Year PubMed ID Journal Vol:Page

Contributors

Name Organization ORCID
Arnold Kriegstein University of California, San Francisco 0000-0001-5742-2990
Mengyi Song University of California, San Fransisco 0000-0002-6112-8521
Clara V Siebert
Juan A Moriano
Songcang Chen
Zhenmeiyu Li
Arturo Alvarez-Buylla

Project(s) this Collection Belongs To

ID Title
nemo:prj-e4h6v61 A Multidisciplinary Center for Developing Human and Non-human Primate Brain Cell Atlases
nemo:prj-p9d9th5

Brain Region(s) of Interest

Name
ganglionic eminence (VZ in basal nuclei)

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-n6b0x7w BICAN Basal Ganglia package collection BICAN Basal Ganglia package ongoing

Documentation


NeMO Citation:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473