NeMO Identifier: Collection

NeMO ID: nemo:dat-ni6b3nk

  • Collection Name: A Cross-Species Enhancer AAV Toolkit for Cell Type-Specific Targeting Across the Basal Ganglia
  • Short Name:
  • Programs: biccn

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: rhesus macaque , house mouse
  • Assays: transcriptome
  • Anatomical Regions: basal ganglia
  • Modalities: transcriptome
  • Techniques: smart-seq v4
  • Specimen Type:
  • Keywords: Basal Ganglia , cell type-specific targeting , enhancer AAV , viral vectors , Dopaminergic Neurons , comparative genomics , gene regulation , macaque
  • Contact:
  • Grant Numbers: 1RF1MH121274
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open
  • Data License: CC BY 4.0

Data associated with this Publication

DOI Year PubMed ID Journal Vol:Page

Contributors

Name Organization ORCID
Morgan E Wirthlin Allen Institute, Brain Science ORCID iD icon 0000-0001-7967-7070
Avery C Hunker
Saroja Somasundaram Allen Institute
M Nathaly Lerma
William D Laird
Victoria Omstead
Nelson J Johansen Allen Institute, Brain Science ORCID iD icon 0000-0002-4436-969X
Sara Vargas
Naz Taskin
Natalie Weed
Yemeserach M Bishaw
Bryan B Gore
Marcus Hooper
Yoav Ben-Simon
Ximena Opitz-Araya
Refugio A Martinez
Sharon W Way
Bargavi Thyagarajan Allen Institute, Brain Science ORCID iD icon 0000-0003-3871-6410
Sven Otto
Raymond E A Sanchez
Jason R Alexander
Avalon Amaya
Adam Amster
Joel Arbuckle
Angela Ayala
Pam M Baker
Tyler Barcelli
Stuard Barta
Darren Bertagnolli Allen Institute, Brain Science ORCID iD icon 0000-0002-6626-1567
Cameron Bielstein
Prajal Bishwakarma
Jessica Bowlus
Gabriella Boyer
Krissy Brouner
Brittny Casian
Tamara Casper Allen Institute, Brain Science ORCID iD icon 0000-0003-1638-3651
Anish Bhaswanth Chakka Allen Institute, Brain Science ORCID iD icon 0000-0002-1095-1817
Rushil Chakrabarty Allen Institute, Brain Science ORCID iD icon 0000-0003-1722-8557
Michael Clark Allen Institute, Brain Science ORCID iD icon 0000-0002-8006-4332
Kaity Colbert
Scott Daniel
Tim Dawe
Maxwell Departee
Peter DiValentin
Nicholas P Donadio
Nadezhda I Dotson
Deepanjali Dwivedi
Tom Egdorf
Tim Fliss
Amanda Gary
Jeff Goldy Allen Institute, Brain Science ORCID iD icon 0000-0001-5140-6922
Conor Grasso
Erin L Groce
Kathryn Gudsnuk
Warren Han
Zeb Haradon
Sam Hastings
Olivia Helback
Windy V Ho
Cindy Huang
Tye Johnson
Danielle L Jones
Zoe Juneau
Jaimie Kenney
Madison Leibly
Su Li
Elizabeth Liang
Henry Loeffler
Nicholas A Lusk
Zachary Madigan
Jessica Malloy
Jocelin Malone
Rachel McCue Allen Institute, Brain Science ORCID iD icon 0000-0003-4339-7581
Jose Melchor
John K Mich
Skyler Moosman
Elyse Morin
Robyn Naidoo
Dakota Newman
Kiet Ngo
Katrina Nguyen
Aaron L Oster
Ben Ouellette
Alana A Oyama
Nick Pena
Trangthanh Pham Allen Institute, Brain Science ORCID iD icon 0000-0002-4738-5062
Elliot Phillips Allen Institute, Brain Science ORCID iD icon 0009-0008-2762-6608
Christina Pom
Lydia Potekhina
Shea Ransford
Melissa Reding
Dean F Rette
Cade Reynoldson
Christine Rimorin
Ana Rios Sigler
Dana B Rocha
Kara Ronellenfitch
Augustin Ruiz
Lane Sawyer
Josh P Sevigny
Nadiya V Shapovalova
Noah Shepard
Lyudmila Shulga
Sherif Soliman
Brian Staats
Michael J Taormina
Michael Tieu Allen Institute, Brain Science ORCID iD icon 0000-0001-9286-5623
Yimin Wang
Josh Wilkes
Toren Wood
Thomas Zhou
Ali Williford
Nicholas Dee Allen Institute, Brain Science ORCID iD icon 0000-0002-2831-9254
Tyler Mollenkopf
Lydia Ng
Luke Esposito
Brian Kalmbach Allen Institute ORCID iD icon 0000-0003-3136-8097
Shenqin Yao
Jeanelle Ariza
Forrest Collman
Jeremy Miller Allen Institute
Shoaib Mufti
Kimberly Smith
Jack Waters
Ina Ersing
Marcella Patrick
Hongkui Zeng Allen Institute ORCID iD icon 0000-0002-0326-5878
Ed S Lein Allen Institute ORCID iD icon 0000-0001-9012-6552
Yoshiko Kojima
Greg Horwitz
Boaz P Levi
Tanya L Daigle
Bosiljka Tasic Allen Institute ORCID iD icon 0000-0002-6861-4506
Trygve E Bakken Allen Institute ORCID iD icon 0000-0003-3373-7386
Jonathan T Ting Allen Institute ORCID iD icon 0000-0001-8266-0392

Project(s) this Collection Belongs To

ID Title
nemo:grn-uefbssz Cell class- or type-specific viruses for brain-wide labeling and neural circuit examination

Brain Region(s) of Interest

Name
basal ganglia

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-n6b0x7w BICAN Basal Ganglia package collection BICAN Basal Ganglia package ongoing

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:dat-pdcpb9c A Cross-Species Enhancer AAV Toolkit for Cell Type-Specific Targeting Across the Basal Ganglia: Raw_SMART-Seq_v4 files Basal_Ganglia_Enhancer_AAV_Toolkit_raw_SSv4

Documentation