NeMO Identifier: Collection

NeMO ID: nemo:dat-ni6b3nk

  • Collection Name: A Cross-Species Enhancer AAV Toolkit for Cell Type-Specific Targeting Across the Basal Ganglia
  • Short Name:
  • Programs: biccn

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: rhesus macaque , house mouse
  • Assays: transcriptome
  • Anatomical Regions: basal ganglia
  • Modalities: transcriptome
  • Techniques: smart-seq v4
  • Specimen Type:
  • Keywords: Basal Ganglia , cell type-specific targeting , enhancer AAV , viral vectors , Dopaminergic Neurons , comparative genomics , gene regulation , macaque
  • Contact:
  • Grant Numbers: 1RF1MH121274
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open
  • Data License: CC BY 4.0

Data associated with this Publication

DOI Year PubMed ID Journal Vol:Page

Contributors

Name Organization ORCID
Trygve E Bakken Allen Institute 0000-0003-3373-7386
Brian Kalmbach Allen Institute 0000-0003-3136-8097
Ed S Lein Allen Institute 0000-0001-9012-6552
Jeremy Miller Allen Institute
Saroja Somasundaram Allen Institute
Bosiljka Tasic Allen Institute 0000-0002-6861-4506
Hongkui Zeng Allen Institute 0000-0002-0326-5878
Jonathan T Ting Allen Institute 0000-0001-8266-0392
Darren Bertagnolli Allen Institute for Brain Science 0000-0002-6626-1567
Tamara Casper Allen Institute for Brain Science 0000-0003-1638-3651
Anish Bhaswanth Chakka Allen Institute for Brain Science 0000-0002-1095-1817
Rushil Chakrabarty Allen Institute for Brain Science 0000-0003-1722-8557
Nick Dee Allen Institute for Brain Science 0000-0002-2831-9254
Jeff Goldy Allen Institute for Brain Science 0000-0001-5140-6922
Rachel McCue Allen Institute for Brain Science 0000-0003-4339-7581
Trangthanh Pham Allen Institute for Brain Science 0000-0002-4738-5062
Elliot Phillips Allen Institute for Brain Science 0009-0008-2762-6608
Michael Tieu Allen Institute for Brain Science
Michael Clark Allen Institute for Brain Science
Bargavi Thyagarajan Allen Institute for Brain Science 0000-0003-3871-6410
Nelson J Johansen Allen Institute for Brain Science 0000-0002-4436-969X
Morgan E Wirthlin Allen Institute for Brain Science 0000-0001-7967-7070
Scott Daniel
Victoria Omstead
Sven Otto
Nick Pena
Christine Rimorin
Nadiya V Shapovalova
Naz Taskin
Tyler Mollenkopf
Jack Waters
Shea Ransford
Zoe Juneau
Sam Hastings
Boaz P Levi
Lydia Ng
Kimberly Smith
Avery C Hunker
M Nathaly Lerma
William D Laird
Sara Vargas
Natalie Weed
Yemeserach M Bishaw
Bryan B Gore
Marcus Hooper
Yoav Ben-Simon
Ximena Opitz-Araya
Refugio A Martinez
Sharon W Way
Raymond E A Sanchez
Jason R Alexander
Avalon Amaya
Adam Amster
Joel Arbuckle
Angela Ayala
Pam M Baker
Tyler Barcelli
Stuard Barta
Cameron Bielstein
Prajal Bishwakarma
Jessica Bowlus
Gabriella Boyer
Krissy Brouner
Brittny Casian
Kaity Colbert
Tim Dawe
Maxwell Departee
Peter DiValentin
Nicholas P Donadio
Nadezhda I Dotson
Deepanjali Dwivedi
Tom Egdorf
Tim Fliss
Amanda Gary
Conor Grasso
Erin L Groce
Kathryn Gudsnuk
Warren Han
Zeb Haradon
Olivia Helback
Windy V Ho
Cindy Huang
Tye Johnson
Danielle L Jones
Jaimie Kenney
Madison Leibly
Su Li
Elizabeth Liang
Henry Loeffler
Nicholas A Lusk
Zachary Madigan
Jessica Malloy
Jocelin Malone
Jose Melchor
John K Mich
Skyler Moosman
Elyse Morin
Robyn Naidoo
Dakota Newman
Kiet Ngo
Katrina Nguyen
Aaron L Oster
Ben Ouellette
Alana A Oyama
Christina Pom
Lydia Potekhina
Melissa Reding
Dean F Rette
Cade Reynoldson
Ana Rios Sigler
Dana B Rocha
Kara Ronellenfitch
Augustin Ruiz
Lane Sawyer
Josh P Sevigny
Noah Shepard
Lyudmila Shulga
Sherif Soliman
Brian Staats
Michael J Taormina
Yimin Wang
Josh Wilkes
Toren Wood
Thomas Zhou
Ali Williford
Luke Esposito
Shenqin Yao
Jeanelle Ariza
Forrest Collman
Shoaib Mufti
Ina Ersing
Marcella Patrick
Yoshiko Kojima
Greg Horwitz
Tanya L Daigle

Project(s) this Collection Belongs To

ID Title
nemo:grn-uefbssz Cell class- or type-specific viruses for brain-wide labeling and neural circuit examination

Brain Region(s) of Interest

Name
basal ganglia

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473