| Field |
Value |
| Identifier |
nemo:dat-gnot1gb |
| Dataset Name |
Single Cell Epigenomic Atlas of the Developing Human Cortex |
| Version |
NA |
| Release Date |
NA |
| DOI |
NA |
| Source Data URL |
This is a restricted access dataset. Instructions for controlled access are available at https://nemoarchive.org/resources/accessing-controlled-access-data.php |
| Dataset Collection URL |
NA |
| Description |
To characterize the chromatin state landscape of the developing human brain at single cell resolution, we performed scATAC-seq on primary samples of the human forebrain at mid-gestation (n = 6 individuals), including samples of dorsolateral prefrontal cortex (PFC), primary visual cortex (V1), primary motor cortex (M1), primary somatosensory cortex, dorso-lateral parietal cortex, temporal cortex, insular cortex, and the medial ganglionic eminence (MGE). In addition, we generated scATAC-seq data from cortical organoids derived via directed differentiation from three genetically normal individuals (13234, H-28126, H1) at three time points of differentiation. |
| Keywords |
|
| Total Files in Collection |
0 |
| Total Size in Collection (in GB) |
0.0 |
| Authors |
Tomasz Nowakowski, Ryan Ziffra, Seth Ament |
| Organization |
University of California, San Francisco |
| Contact Person |
Tomasz Nowakowski |
| Contact E-Mail |
tomasz.nowakowski@ucsf.edu |
| External Identifier |
kriegstein_sc_ATACseq |
| Grant Name |
U01MH114825, U01MH116438, U01MH115747, R01MH109907 |
| Consortium |
BICCN |
| Data Repository |
NeMO |
| Data Repository RRID |
RRID:SCR_016152 |
| Data License |
CC BY 4.0 |
| Data Access |
https://biccn.org/terms-of-use |
| Community Standards |
https://biccn.org/standards |
| Study Organism |
human |
| Protocol ID |
http://doi.org/10.17504/protocols.io.pjvdkn6 |
