NeMO Identifier: Collection

NeMO ID: nemo:dat-qwqfftg

  • Collection Name: RF1 Tilgner. Single cell isoform expression across mouse brain regions and development (tilgner_10x_scRNA)
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COLLECTION METADATA

  • Description:

  • Illumina sequencing of fragmented 10x cDNA libraries obtained from two replicates each of 5 brain regions and multiple developmental timepoints

  • Collection Type: Dynamic
  • Taxa: house mouse
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  • Keywords: single-cell , transcriptomics , adult , development , hippocampus , visual cortex , thalamus , Striatum , cerebellum
  • Contact: Hagen Tilgner
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  • Data Access: open
  • Data License: CC BY 4.0

Contributors

Name Organization ORCID
Anoushka Joglekar Cornell University 0000-0002-7818-6867
Hagen Tilgner Cornell University 0000-0002-7058-3606

Documentation


Data Citation:

Dataset: Anoushka Joglekar and Hagen Tilgner (2023) Single cell isoform expression across mouse brain regions and development. [Dataset]. Available from: https://assets.nemoarchive.org/dat-qwqfftg

NeMO Citation:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473