NeMO Identifier: Collection

NeMO ID: nemo:dat-t9e8c9u

  • Collection Name: Raw data for snRNA_SMART dataset from the Allen Institute
  • Short Name: BICCN_MOp_snRNA_SMART_AIBS
  • Programs: biccn

COLLECTION METADATA

  • Description:

  • Raw data associated with the publication 'An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types'

  • Collection Type: Static
  • Taxa:
  • Assays:
  • Anatomical Regions:
  • Modalities: transcriptome
  • Techniques: smart-seq v4
  • Specimen Type:
  • Keywords:
  • Contact: Hongkui Zeng
  • Grant Numbers:
  • Funding Agency:
  • URL Protocol:
  • Data Access: open

Contributors

Name Organization ORCID
Hongkui Zeng Allen Institute 0000-0002-0326-5878

Project(s) this Collection Belongs To

ID Title
nemo:std-5jvcwm1 DNA methylation profiling of genomic DNA in individual mouse brain cell nuclei (RS1.1)

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:dat-ch1nqb7 A transcriptomic and epigenomic cell atlas of mouse primary motor cortex files

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473