NeMO Identifier: Collection

NeMO ID: nemo:col-iefmnby

  • Collection Name: Developing Mouse Brain Atlas: Multiome analysis of single nuclei from embryonic and postnatal mouse brain (MetaCumulative)
  • Short Name: zeng_10XMultiome_mouse_nuclei (MetaCumulative)
  • Programs: bican

COLLECTION METADATA

  • Description:

  • As part of the BRAIN Initiative Cell Atlas Network, single nuclei from mouse were assayed using the 10X Genomics Multiome platform.

  • Collection Type: Dynamic
  • Taxa: house mouse
  • Assays: multiome; chromatin , multiome; transcriptome
  • Anatomical Regions: Hindbrain , Hippocampal formation , Isocortex , Cerebellum , Hypothalamus , Cerebral nuclei , Medulla , Olfactory areas , Midbrain , Thalamus , Cortical subplate
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords: BICAN , Rapid Release
  • Contact:
  • Grant Numbers: U01MH130962
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open

Project(s) this Collection Belongs To

ID Title
nemo:prj-ggc1k9k Comprehensive single-cell atlas of the developing mouse brain

Brain Region(s) of Interest

Name
Hindbrain
Hippocampal formation
Isocortex
Cerebellum
Hypothalamus
Cerebral nuclei
Medulla
Olfactory areas
Midbrain
Thalamus
Cortical subplate

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-4hjv07d Developing Mouse Brain Atlas: Multiome analysis of single nuclei from embryonic and postnatal mouse brain (BICAN-2024-09-RR-SCO MetaSnapshot) files zeng_10XMultiome_mouse_nuclei (BICAN-2024-09-RR-SCO MetaSnapshot) ongoing
nemo:col-myr9nn1 Developing Mouse Brain Atlas: Multiome analysis of single nuclei from embryonic and postnatal mouse brain (BICAN-2026-01-RR-SCO MetaSnapshot) collection zeng_10XMultiome_mouse_nuclei (BICAN-2026-01-RR-SCO MetaSnapshot)

Documentation