Developing Mouse Brain Atlas: Multiome analysis of single nuclei from embryonic and postnatal mouse brain (MetaCumulative)

Program
bican
Collection Type
Dynamic
Keywords
Rapid Release

As part of the BRAIN Initiative Cell Atlas Network, single nuclei from mouse were assayed using the 10X Genomics Multiome platform.

Data citation
No data citation listed
Funding agency
NIMH
Grant numbers
U01MH130962
Access
open
License
No license listed

Download URLs

  • Browse HTTP server https://data.nemoarchive.org/bican/grant/BICAN_Dev_Mouse/aibs/multimodal/nuclei/10xMultiome_ATACseq/house_mouse/demultiplexed_fastq
    Raw HTTP
  • Browse HTTP server https://data.nemoarchive.org/bican/grant/BICAN_Dev_Mouse/aibs/multimodal/nuclei/10xMultiome_RNAseq/house_mouse/demultiplexed_fastq
    Raw HTTP

Anatomical Regions

  • Hindbrain
  • Hippocampal formation
  • Isocortex
  • Cerebellum
  • Hypothalamus
  • Cerebral nuclei

Taxa

house mouse

Projects this collection belongs to

  • nemo:prj-ggc1k9k
    Comprehensive single-cell atlas of the developing mouse brain

Assays, Modalities & Techniques

Assays
multiome; chromatin multiome; transcriptome
Modalities
multimodal
Techniques
10X genomics multiome;atac-seq 10X genomics multiome;rnaseq

Child collections

  • nemo:col-4hjv07d
    Developing Mouse Brain Atlas: Multiome analysis of single nuclei from embryonic and postnatal mouse brain (BICAN-2024-09-RR-SCO MetaSnapshot)
  • nemo:col-myr9nn1
    Developing Mouse Brain Atlas: Multiome analysis of single nuclei from embryonic and postnatal mouse brain (BICAN-2026-01-RR-SCO MetaSnapshot)
  • nemo:col-8i9bjx2
    BICAN__MetaSnapshot__2026-09-25__BICAN_Dev_Mouse__aibs__nuclei__10X_genomics_multiome__house_mouse__demultiplexed_fastq__open__no_restriction

Parent collections

No parent collections listed for Developing Mouse Brain Atlas: Multiome analysis of single nuclei from embryonic and postnatal mouse brain (MetaCumulative) collection.

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for Developing Mouse Brain Atlas: Multiome analysis of single nuclei from embryonic and postnatal mouse brain (MetaCumulative) collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources