Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from human brain - processed (BICAN-2026-09-RR-SCO MetaSnapshot)
Program
bican
Collection Type
Static
Keywords
Rapid Release
2026
As part of the BRAIN Initiative Cell Atlas Network, single nuclei from humans were assayed using the 10X Genomics Multiome platform - processed (BICAN-2026-09-RR-SCO MetaSnapshot)
Download URLs
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Download BDBag https://data.nemoarchive.org/bdbags/BICAN/BICAN-2026-09-RR-SCO/col-0nbutfr__BICAN__MetaSnapshot__2026-09-25__HMBA__aibs__nuclei__10X_genomics_multiome__human__processed__open__no_restriction.tgzProcessed BDBag
Anatomical Regions
- medial division of centromedian nucleus of thalamus
- dorsal division of basomedial nucleus
- shell of nucleus accumbens
- core of nucleus accumbens
- medial (posterior) entorhinal cortex
- ventral subdivision of BNSTl
- granular cell layer of VeF
- medial division of PPHC (area TH)
- rostral subiculum
- medullary reticular formation
- nucleus of diagonal band
- stratum pyramidale of caudal CA2
- posterior hypothalamic nucleus
- tail of caudate
- magnocellular division of reticular nucleus
- substantia nigra, compact part
- intermediate division of lateral nucleus
- multiform (lateral) division of MD
- stratum pyramidale of rostral CA3
- proximal parasubiculum
- stratum pyramidale of rostral CA1
- anteroventral nucleus of thalamus
- temporal claustrum
- zona incerta
- amygdalostriatal transition area
- white matter of hindbrain
- subparaventricular zone
- molecular layer of VeA
- medial mammillary nucleus
- external segment of globus pallidus
- caudal presubiculum (postsubiculum)
- stratum pyramidale of caudal CA1
- body of caudate
- granular cell layer of PVPi
- ventral tegmental area
- anterior nucleus of pulvinar
- koniocellular layer of DLG
- amiculum of the olive
- central nuclear group
- bed nucleus of stria terminalis
- substantia nigra, reticular part
- subgenual (subcallosal) division of MFC (area 25)
- laterodorsal portion of STH
- uncal subiculum
- stratum lacunosum-moleculare of uncal CA1
- layer 6 of DLG
- primary visual cortex (striate cortex, area V1/17)
- pregeniculate nucleus
- caudal prosubiculum
- lateral posterior nucleus of thalamus
- anterior hypothalamic nucleus
- parabrachial pigmented nucleus
- central subdivision of BNSTl
- granular layer of caudal dentate gyrus
- horizontal subdivision of nucleus of diagonal band
- dorsal subdivision of VLC
- ventral claustrum
- rostral division of VL
- central medial nucleus of thalamus
- lateral (anterior) entorhinal cortex
- substantia innominata
- stratum pyramidale of uncal CA2
- Purkinje cell layer of VePi
- rostral subdivision of BNSTm
- rostral presubiculum
- pontine nucleus
- lateral subdivision of central nucleus
- Ventral pallidus
- granular cell layer of VeA
- magnocellular (medial) division of MD
- rostral prosubiculum
- granular layer of uncal dentate gyrus
- granular layer of rostral dentate gyrus
- nucleus of the field of Forel
- polyform layer of caudal dentate gyrus
- distal parasubiculum
- molecular layer of CBLA
- lateral habenular nucleus
- ventral division of lateral septal nucleus
- head of caudate
- lateral olfactory area
- stratum lacunosum-moleculare of uncal CA2
- caudal division of central lateral nucleus
- caudal subdivision of area 21
- red nucleus
- lateral hypothalamic area, tuberal part
- granular cell layer of PVA
- posteroventral putamen
- stratum pyramidale of caudal CA3
- granular cell layer of CBLF
- midbrain (mesencephalon)
- lateral preoptic area
- raphe magnus nucleus
- venrtral subdivision of CoP
- parvocellular (central) division of MD
- Dorsal claustrum
- decussation of superior cerebellar peduncle
- lateral hypothalamic area, posterior part
- reticular nucleus of thalamus
- molecular layer of PVA
- parvocellular division of VPM
- caudal division of ventral posterior lateral nucleus
- uncal prosubiculum
- molecular layer of CBLPi
- pre-Edinger-Westphal nucleus
- limitans nucleus
- peri-caudate ependymal and subependymal zone
- stratum pyramidale of uncal CA1
- rostral division of ventral posterior lateral nucleus
- central gray of medulla oblongata
- parvocellular division of VA
- putamen
- internal segment of globus pallidus
- polyform layer of rostral dentate gyrus
- periventricular area of thalamus
- lateral dorsal nucleus of thalamus
- ventral subdivision of BNSTlc
- parvicellular layer of DLG
- caudal subiculum
- dorsal medial geniculate nucleus
- lateroventral portion of STH
- inferior olive, principal nucleus
- pyramidal cells of rostral CA4
- medial preoptic area
- stratum pyramidale of uncal CA3
- paraventricular nucleus of hypothalamus
- amygdalohippocampal transition area
- centromedian nucleus of thalamus
- dentate (lateral) nucleus
- myelencephalon (medulla oblongata)
- dorsal (magnocellular) division of basolateral nucleus
- white matter of forebrain
Taxa
human
Projects this collection belongs to
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Functionally guided adult whole brain cell atlas in human and NHP
Assays, Modalities & Techniques
Child collections
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Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from human brain - processed (BICAN-2026-09-RR-SCO Snapshot RNA)
Parent collections
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Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from human brain - processed (MetaCumulative)collection
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BICAN Rapid Release Inventory: Single cell transcriptomics and epigenomics (BICAN-2026-09-RR-SCO)collection
Associated publications
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Contributors
No contributors listed for Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from human brain - processed (BICAN-2026-09-RR-SCO MetaSnapshot) collection.
Cross-archive links
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