BICAN-2026-09-RR-SCO

Program
bican
Collection Type
Static

BICAN-2026-09-RR-SCO

Data citation
No data citation listed
Funding agency
NIMH
Grant numbers
UM1MH130994, UM1MH130981, UM1MH130966, U01MH130995, U01MH130962, R01MH134799, R01MH134833
Access
open
License
No license listed

Download URLs

No download URLs listed for this collection.

Anatomical Regions

  • ventral group of lateral nucleus
  • Hindbrain
  • rostral subdivision of area 20
  • dorsal division of basomedial nucleus
  • Hippocampal formation
  • Hippocampal region

Taxa

Ma's night monkey white-tufted-ear marmoset nine-banded armadillo human crab-eating macaque rhesus macaque pig-tailed macaque gray short-tailed opossum house mouse domestic ferret chimpanzee Norway rat pig nothern tree shrew naked mole-rat gray mouse lemur

Projects this collection belongs to

  • Center for Multiomic Human Brain Cell Atlas
  • Functionally guided adult whole brain cell atlas in human and NHP
  • An Atlas of Human Brain Cell Variation
  • Spatiotemporal epigenomic and chromosomal architectural cell atlas of developing human brains
  • Comprehensive single-cell atlas of the developing mouse brain
  • Molecular and anatomical atlases from progenitors to adult neurons in the mouse spinal cord

Assays, Modalities & Techniques

Assays
transcriptome methylation multiome; chromatin multiome; transcriptome HT; transcriptome transciptome; cellplex_barcode transciptome; cellplex_RNAseq HT; cellplex_barcode HT; cellplex_RNAseq multimodal LT; transcriptome
Modalities
transcriptome epigenome multimodal
Techniques
10x chromium 3' v3 sequencing 10x chromium 3' v3.1 sequencing 10X genomics multiome;atac-seq 10X genomics multiome;rnaseq m3c-seq smart-seq v4 10xV3.1_HT_CellPlex;Barcode 10xV3.1_HT 10xV3.1_HT_CellPlex;GEX 10x Chromium 3' v4 sequencing 10xV3.1_CellPlex;Barcode 10xV3.1_CellPlex;GEX droplet paired-tag; DNA droplet paired-tag; RNA multiplex droplet paired-tag; RNA 10x chromium 5' v3 sequencing 10x chromium 5' v5.2 sequencing SMARTSeqSC snmCT-seq 10x Chromium 3' v4-OCM sequencing 10xV3.1_LT

Child collections

  • Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain (BICAN-2026-01-RR-SCO Snapshot)
  • Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain (General research use) (BICAN-2026-01-RR-SCO Snapshot)
  • Developmental Multiomics: Single-nucleus multi-omic DNA methylation and transcriptome sequencing (snmCT-seq) from human brain (General research use) (BICAN-2026-01-RR-SCO Snapshot)
  • Developing Mouse Brain Atlas: RNAseq of single cells from embryonic and postnatal mouse brain (10X v3.1) (BICAN-2026-01-RR-SCO Snapshot)
  • Developing Mouse Brain Atlas: RNAseq of single cells from embryonic and postnatal mouse brain (10X v3.1 HT) (BICAN-2026-01-RR-SCO Snapshot)
  • Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from rat brain (BICAN-2026-01-RR-SCO MetaSnapshot)

Parent collections

No parent collections listed for BICAN-2026-09-RR-SCO collection.

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for BICAN-2026-09-RR-SCO collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources