NeMO Identifier: Collection

NeMO ID: nemo:col-0onu0di

  • Collection Name: Developing Mouse Brain Atlas: Multiome analysis of single nuclei from embryonic and postnatal mouse brain (BICAN-2026-01-RR-SCO Snapshot ATAC)
  • Short Name: zeng_10XMultiome_mouse_nuclei (BICAN-2026-01-RR-SCO Snapshot ATAC)
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: house mouse
  • Assays: multiome; chromatin
  • Anatomical Regions: Hindbrain , Medulla , Hippocampal formation , Olfactory areas , Isocortex , Cerebellum , Midbrain , Hypothalamus , Cerebral nuclei , Thalamus , Cortical subplate
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq
  • Specimen Type: nuclei
  • Keywords: BICAN , Rapid Release , 2026
  • Contact:
  • Grant Numbers: U01MH130962
  • Funding Agency: NIMH
  • URL Protocol: Protocol
  • Data Access: open

Project(s) this Collection Belongs To

ID Title
nemo:prj-ggc1k9k Comprehensive single-cell atlas of the developing mouse brain

Brain Region(s) of Interest

Name
Hindbrain
Medulla
Hippocampal formation
Olfactory areas
Isocortex
Cerebellum
Midbrain
Hypothalamus
Cerebral nuclei
Thalamus
Cortical subplate

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-myr9nn1 Developing Mouse Brain Atlas: Multiome analysis of single nuclei from embryonic and postnatal mouse brain (BICAN-2026-01-RR-SCO MetaSnapshot) collection zeng_10XMultiome_mouse_nuclei (BICAN-2026-01-RR-SCO MetaSnapshot)

Documentation


Data Citation:

Dataset: Darren Bertagnolli, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Michael Clark, Nick Dee, Rebecca Ferrer, Yuan Gao, Jessica Gloe, Jeff Goldy, Junitta Guzman, Windy Ho, Katelyn James, Matthew Jungert, Madhav Kannan, Changkyu Lee, Ruiyang Liu, Rachel McCue, Beagan Nguy, Chelsea M Pagan, Trangthanh Pham, Elliot Phillips, Kimberly A. Smith, Emma D. Thomas, Michael Tieu, Amy Torkelson, Alex Tran, Cindy T. J. van Velthoven, Zizhen Yao, Hongkui Zeng, Paola Arlotta (2024) Developing Mouse: Multiome analysis of single nuclei from embryonic and postnatal mouse brain [Dataset]. Available from https://assets.nemoarchive.org/nemo:col-myr9nn1