BICAN__MetaSnapshot__2025-08-12__HMBA__princeton_lein__nuclei__10X_genomics_multiome__white-tufted-ear_marmoset__demultiplexed_fastq__coh-8boto7m__no_restriction

Program
bican
Collection Type
Static

This is a MetaSnapshot collection for the 10X_genomics_multiome technique with criteria: HMBA__princeton_lein__nuclei__10X_genomics_multiome__white-tufted-ear_marmoset__demultiplexed_fastq__coh-8boto7m__no_restriction.

Data citation
Dataset: Lakme Caceres, Shu Dan, Michael DeBerardine, Jessica Feliciano, Kirsten Levandowski, Reilly Nakamoto, Jessica Schembri, Jitendra Sharma, Atsushi Takahashi, Tsephel Thangpey, Ning Wang, Qiangge Zhang, Guoping Feng, Fenna Krienen (2024) Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain [Dataset]. Available from: https://assets.nemoarchive.org/col-25r5d04.
Funding agency
NIMH
Grant numbers
UM1MH130981
Access
open
License
No license listed

Download URLs

No download URLs listed for this collection.

Anatomical Regions

  • hippocampal gyrus (formation)
  • pulvinar of thalamus
  • Hippocampal region
  • caudate nucleus
  • mediodorsal nucleus of thalamus
  • periaqueductal gray substance

Taxa

white-tufted-ear marmoset

Projects this collection belongs to

  • nemo:prj-t8d9ty5
    Functionally guided adult whole brain cell atlas in human and NHP

Assays, Modalities & Techniques

Assays
multiome; chromatin multiome; transcriptome
Modalities
multimodal
Techniques
10X genomics multiome;atac-seq 10X genomics multiome;rnaseq

Child collections

  • nemo:col-h982yof
    BICAN__Snapshot__2025-08-12__HMBA__princeton_lein__nuclei__10xMultiome_RNAseq__white-tufted-ear_marmoset__demultiplexed_fastq__coh-8boto7m__no_restriction
  • nemo:col-0nawjis
    BICAN__Snapshot__2025-08-12__HMBA__princeton_lein__nuclei__10xMultiome_ATACseq__white-tufted-ear_marmoset__demultiplexed_fastq__coh-8boto7m__no_restriction

Parent collections

  • nemo:col-em73agj
    BICAN__MetaCumulative__2025-08-12__HMBA__princeton_lein__nuclei__10X_genomics_multiome__white-tufted-ear_marmoset__demultiplexed_fastq__coh-8boto7m__no_restriction
    collection
  • nemo:col-gnbwm7e
    BICAN-2025-09-RR-SCO
    collection

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for BICAN__MetaSnapshot__2025-08-12__HMBA__princeton_lein__nuclei__10X_genomics_multiome__white-tufted-ear_marmoset__demultiplexed_fastq__coh-8boto7m__no_restriction collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources