BICAN__Snapshot__2025-08-12__BICAN_Dev_Mouse__aibs__nuclei__10xMultiome_ATACseq__house_mouse__demultiplexed_fastq__coh-8ex6kd4__no_restriction

Program
bican
Collection Type
Static

This collection contains house mouse demultiplexed_fastq files from the project BICAN_Dev_Mouse. Files in this collection include 10xMultiome_ATACseq data from nuclei.

Data citation
Dataset: Darren Bertagnolli, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Michael Clark, Nick Dee, Rebecca Ferrer, Yuan Gao, Jessica Gloe, Jeff Goldy, Junitta Guzman, Windy Ho, Katelyn James, Matthew Jungert, Madhav Kannan, Changkyu Lee, Ruiyang Liu, Rachel McCue, Beagan Nguy, Chelsea M Pagan, Trangthanh Pham, Elliot Phillips, Kimberly A. Smith, Emma D. Thomas, Michael Tieu, Amy Torkelson, Alex Tran, Cindy T. J. van Velthoven, Zizhen Yao, Hongkui Zeng, Paola Arlotta (2024) Developing Mouse Brain Atlas: Multiome analysis of single nuclei from embryonic and postnatal mouse brain [Dataset]. Available from https://assets.nemoarchive.org/col-6rm5o3p.
Funding agency
NIMH
Grant numbers
U01MH130962
Access
open
License
No license listed

Download URLs

No download URLs listed for this collection.

Anatomical Regions

  • Hindbrain
  • Medulla
  • Hippocampal formation
  • Cerebral nuclei
  • Olfactory areas
  • Isocortex

Taxa

house mouse

Projects this collection belongs to

  • nemo:prj-ggc1k9k
    Comprehensive single-cell atlas of the developing mouse brain

Assays, Modalities & Techniques

Assays
multiome; chromatin
Modalities
multimodal
Techniques
10X genomics multiome;atac-seq

Child collections

No child collections listed for BICAN__Snapshot__2025-08-12__BICAN_Dev_Mouse__aibs__nuclei__10xMultiome_ATACseq__house_mouse__demultiplexed_fastq__coh-8ex6kd4__no_restriction collection.

Parent collections

  • nemo:col-6rm5o3p
    BICAN__MetaSnapshot__2025-08-12__BICAN_Dev_Mouse__aibs__nuclei__10X_genomics_multiome__house_mouse__demultiplexed_fastq__coh-8ex6kd4__no_restriction
    collection

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for BICAN__Snapshot__2025-08-12__BICAN_Dev_Mouse__aibs__nuclei__10xMultiome_ATACseq__house_mouse__demultiplexed_fastq__coh-8ex6kd4__no_restriction collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources