Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from human brain (BICAN-2026-01-RR-SCO Snapshot RNA)

Program
bican
Collection Type
Static
Specimen Type
nuclei
Keywords
Rapid Release 2026

As part of the BRAIN Initiative Cell Atlas Network, single nuclei from humans were assayed using the 10X Genomics Multiome platform. (BICAN-2026-01-RR-SCO Snapshot RNA)

Data citation
Dataset: Trygve Bakken, Darren Bertagnolli, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Michael Clark, Nick Dee, Rebecca Ferrer, Yuanyuan Fu, Aaron Garcia, Jessica Gloe, Jeff Goldy, Junitta Guzman, Daniel Hirschstein, Windy Ho, Rebecca Hodge, Katelyn James, Nelson Johansen, Danielle L. Jones, Kathryn Jordan, Matthew Jungert, Madhav Kannan, Inkar Kapen, Lauren Kruse, Changkye Lee, Boaz P. Levi, Rachel McCue, Beagan Nguy, Nicholas Peña, Trangthanh Pham, Elliot Phillips, Nadiya V. Shapovalova, Kimberly A. Smith, Cassandra Sobieski, Michael Tieu, Amy Torkelson, Alex Tran, Jingyi Xie, Zizhen Yao, Dan Yuan, Hongkui Zeng, Ed Lein (2024) Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from human brain [Dataset]. Available from: https://assets.nemoarchive.org/nemo:col-vv7aidi
Funding agency
NIMH
Grant numbers
UM1MH130981
Access
open
License
No license listed

Download URLs

  • Download BDBag https://data.nemoarchive.org/bdbags/BICAN/BICAN-2026-01-RR-SCO/col-3v9uyyq__BICAN__Snapshot__2026-01-15__HMBA__aibs__nuclei__10xMultiome_RNAseq__human__demultiplexed_fastq__open__no_restriction.tgz 6,048 files 15,770.47 GB
    Raw BDBag

Anatomical Regions

  • medial division of centromedian nucleus of thalamus
  • reticular nucleus of thalamus
  • anterior nucleus of pulvinar
  • caudal division of ventral posterior lateral nucleus
  • amiculum of the olive
  • dorsal subdivision of BNSTlc

Taxa

human

Projects this collection belongs to

  • nemo:prj-t8d9ty5
    Functionally guided adult whole brain cell atlas in human and NHP

Assays, Modalities & Techniques

Assays
multiome; transcriptome
Modalities
multimodal
Techniques
10X genomics multiome;rnaseq

Child collections

No child collections listed for Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from human brain (BICAN-2026-01-RR-SCO Snapshot RNA) collection.

Parent collections

  • nemo:col-vv7aidi
    Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from human brain (BICAN-2026-01-RR-SCO MetaSnapshot)
    collection

Associated publications

No publications linked yet.

URL Protocols

Contributors

No contributors listed for Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from human brain (BICAN-2026-01-RR-SCO Snapshot RNA) collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources