Developing Mouse Brain Atlas: RNAseq analysis of single cells from developing mouse brain (10X v3.1) (BICAN-2026-01-RR-SCO Snapshot)

Program
bican
Collection Type
Static
Specimen Type
cells
Keywords
Rapid Release 2026

As part of the BRAIN Initiative Cell Atlas Network, single cells from mouse were assayed by 10X chromium 3' v3.1 sequencing. (BICAN-2026-01-RR-SCO Snapshot)

Data citation
Dataset: Guohua Yuan, Matthew G. Keefe, Marilyn Steyert, Tomasz J. Nowakowski (2024) Developing Mouse Brain Atlas: RNAseq analysis of single cells from developing mouse [Dataset]. Available from: https://assets.nemoarchive.org/nemo:col-9m0k00f
Funding agency
NIMH
Grant numbers
U01MH130962
Access
open
License
No license listed

Download URLs

  • Download BDBag https://data.nemoarchive.org/bdbags/BICAN/BICAN-2026-01-RR-SCO/col-9m0k00f__BICAN__Snapshot__2026-01-15__BICAN_Dev_Mouse__ucsf_nowakowski__cells__10x_v3.1__house_mouse__demultiplexed_fastq__open__no_restriction.tgz 1,120 files 1,375.21 GB
    Raw BDBag

Anatomical Regions

  • Isocortex
  • Thalamus

Taxa

house mouse

Projects this collection belongs to

  • nemo:prj-ggc1k9k
    Comprehensive single-cell atlas of the developing mouse brain

Assays, Modalities & Techniques

Assays
transcriptome
Modalities
transcriptome
Techniques
10x chromium 3' v3.1 sequencing

Child collections

No child collections listed for Developing Mouse Brain Atlas: RNAseq analysis of single cells from developing mouse brain (10X v3.1) (BICAN-2026-01-RR-SCO Snapshot) collection.

Parent collections

  • nemo:col-itnh074
    Developing Mouse Brain Atlas: RNAseq analysis of single cells from developing mouse brain (10X v3.1) (Cumulative)
    collection
  • nemo:col-ow59b0f
    BICAN Rapid Release Inventory: Single cell transcriptomics and epigenomics (BICAN-2026-01-RR-SCO)
    collection

Associated publications

No publications linked yet.

URL Protocols

Contributors

No contributors listed for Developing Mouse Brain Atlas: RNAseq analysis of single cells from developing mouse brain (10X v3.1) (BICAN-2026-01-RR-SCO Snapshot) collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources