NeMO Identifier: Collection

NeMO ID: nemo:col-g4ku5ks

  • Collection Name: Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from pig-tailed macaque brain (BICAN-2026-01-RR-SCO MetaSnapshot)
  • Short Name: lein_10XMultiome_macaque_nuclei (BICAN-2026-01-RR-SCO MetaSnapshot)
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: pig-tailed macaque
  • Assays: multiome; chromatin , multiome; transcriptome
  • Anatomical Regions: head of caudate , tail of caudate , substantia nigra, compact part , shell of nucleus accumbens , core of nucleus accumbens , posteroventral putamen , lateroventral portion of STH , spinal cord , external segment of globus pallidus , putamen , body of caudate , internal segment of globus pallidus
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords: BICAN , Rapid Release , 2026
  • Contact:
  • Grant Numbers: UM1MH130981
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open

Project(s) this Collection Belongs To

ID Title
nemo:prj-t8d9ty5 Functionally guided adult whole brain cell atlas in human and NHP

Brain Region(s) of Interest

Name
head of caudate
tail of caudate
substantia nigra, compact part
shell of nucleus accumbens
core of nucleus accumbens
posteroventral putamen
lateroventral portion of STH
spinal cord
external segment of globus pallidus
putamen
body of caudate
internal segment of globus pallidus

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-zx37wu4 Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from pig-tailed macaque brain (MetaCumulative) collection lein_10XMultiome_macaque_nuclei (MetaCumulative)
nemo:col-ow59b0f BICAN Rapid Release Inventory: Single cell transcriptomics and epigenomics (BICAN-2026-01-RR-SCO) collection BICAN-2026-01-RR-SCO

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-09fee0m Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from pig-tailed macaque brain (BICAN-2026-01-RR-SCO Snapshot ATAC) files lein_10XMultiome_macaque_nuclei (BICAN-2026-01-RR-SCO Snapshot ATAC)
nemo:col-ydsmskm Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from pig-tailed macaque brain (BICAN-2026-01-RR-SCO Snapshot RNA) files lein_10XMultiome_macaque_nuclei (BICAN-2026-01-RR-SCO Snapshot RNA)

Documentation


Data Citation:

Dataset: Trygve Bakken, Darren Bertagnolli, Anish Bhaswanth Chakka, Rushil Chakrabarty, Nick Dee, Rebecca Ferrer, Aaron Garcia, Jeff Goldy, Junitta Guzman, Madeleine Hewitt, Daniel Hirschstein, Windy Ho, Rebecca Hodge, Katelyn James, Danielle L. Jones, Lauren Kruse, Boaz P. Levi, Brian Long, Delissa McMillen, Beagan Nguy, Nicholas Peña, Trangthanh Pham, Jessie Puckett, Matthew Schmitz, Stephanie Seeman, Nadiya V. Shapovalova, Kimberly A. Smith, Cassandra Sobieski, Michael Tieu, Amy Torkelson, Jack Waters, Morgan Wirthlin, Hongkui Zeng, Ed Lein (2026) Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from pig-tailed macaque brain [Dataset]. Available from: https://assets.nemoarchive.org/nemo:col-g4ku5ks