Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain (BICAN-2024-09-RR-SCO Snapshot RNA)

Program
bican
Collection Type
Dynamic
Specimen Type
nuclei
Keywords
Rapid Release 2024
Status
Ongoing

As part of the BRAIN Initiative Cell Atlas Network, single nuclei from white-tufted-ear marmoset brain were assayed by 10X Genomics Multiome platform. (BICAN-2024-09-RR-SCO Snapshot RNA)

Data citation
Dataset: Lakme Caceres, Shu Dan, Michael DeBerardine, Jessica Feliciano, Kirsten Levandowski, Reilly Nakamoto, Jessica Schembri, Jitendra Sharma, Atsushi Takahashi, Tsephel Thangpey, Ning Wang, Qiangge Zhang, Guoping Feng, Fenna Krienen (2024) Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain [Dataset]. Available from: https://assets.nemoarchive.org/col-vdk0cmw.
Funding agency
NIMH
Grant numbers
UM1MH130981
Access
open
License
CC BY 4.0

Download URLs

  • Download BDBag https://data.nemoarchive.org/publication_release/BICAN/UM1MH130981/princeton_lein/BICAN_krienen_10XMultiome_marmoset_nuclei-col-vdk0cmw-2024-09-21/col-vdk0cmw_bag_1_krienen_10XMultiome_marmoset_nuclei_rna-col-hfyskoa-2024-09-21.tgz 1,953 files 4,791.03 GB
    Raw BDBag
  • Browse HTTP server https://data.nemoarchive.org/bican/grant/HMBA/krienen/multimodal/sncell/10xMultiome_RNAseq/white_tufted_ear_marmoset/raw/ 1,953 files 4,791.03 GB
    Raw HTTP

Anatomical Regions

No anatomical region listed for Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain (BICAN-2024-09-RR-SCO Snapshot RNA) collection.

Taxa

white-tufted-ear marmoset

Projects this collection belongs to

  • nemo:prj-t8d9ty5
    Functionally guided adult whole brain cell atlas in human and NHP

Assays, Modalities & Techniques

Assays
multiome; transcriptome
Modalities
multimodal
Techniques
10X genomics multiome;rnaseq

Child collections

No child collections listed for Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain (BICAN-2024-09-RR-SCO Snapshot RNA) collection.

Parent collections

  • nemo:col-vdk0cmw
    Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain (BICAN-2024-09-RR-SCO MetaSnapshot)
    files Ongoing

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain (BICAN-2024-09-RR-SCO Snapshot RNA) collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources