NeMO Identifier: Collection

NeMO ID: nemo:col-vdk0cmw

  • Collection Name: Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain (BICAN-2024-09-RR-SCO MetaSnapshot)
  • Short Name: krienen_10XMultiome_marmoset_nuclei (BICAN-2024-09-RR-SCO MetaSnapshot)
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: white-tufted-ear marmoset
  • Assays: multiome; chromatin , multiome; transcriptome
  • Anatomical Regions:
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords: BICAN , Rapid Release , 2024
  • Contact:
  • Grant Numbers: UM1MH130981
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open
  • Data License: CC BY 4.0
  • Submission Status: Ongoing

Project(s) this Collection Belongs To

ID Title
nemo:prj-t8d9ty5 Functionally guided adult whole brain cell atlas in human and NHP

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-cnav2ma Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain (MetaCumulative) collection krienen_10XMultiome_marmoset_nuclei (MetaCumulative)

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-hfyskoa Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain (BICAN-2024-09-RR-SCO Snapshot RNA) files krienen_10XMultiome_marmoset_nuclei (BICAN-2024-09-RR-SCO Snapshot RNA) ongoing
nemo:col-2qdp56h Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain (BICAN-2024-09-RR-SCO Snapshot ATAC) files krienen_10XMultiome_marmoset_nuclei (BICAN-2024-09-RR-SCO Snapshot ATAC) ongoing

Documentation


Data Citation:

Dataset: Lakme Caceres, Shu Dan, Michael DeBerardine, Jessica Feliciano, Kirsten Levandowski, Reilly Nakamoto, Jessica Schembri, Jitendra Sharma, Atsushi Takahashi, Tsephel Thangpey, Ning Wang, Qiangge Zhang, Guoping Feng, Fenna Krienen (2024) Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain [Dataset]. Available from: https://assets.nemoarchive.org/col-vdk0cmw.