NeMO Identifier: Collection

NeMO ID: nemo:col-vdk0cmw

  • Collection Name: Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain
  • Short Name: krienen_10XMultiome_marmoset_nuclei
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: white-tufted-ear marmoset
  • Assays: multiome; chromatin , multiome; transcriptome
  • Anatomical Regions:
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords:
  • Contact:
  • Grant Numbers: UM1MH130981
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open
  • Data License: CC BY 4.0
  • Submission Status: Ongoing

Project(s) this Collection Belongs To

ID Title
nemo:prj-t8d9ty5 Functionally guided adult whole brain cell atlas in human and NHP

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-hfyskoa Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain: RNAseq files krienen_10XMultiome_marmoset_nuclei_rna ongoing
nemo:col-2qdp56h Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain: ATACseq files krienen_10XMultiome_marmoset_nuclei_atac ongoing

Documentation


Data Citation:

Dataset: Lakme Caceres, Shu Dan, Michael DeBerardine, Jessica Feliciano, Kirsten Levandowski, Reilly Nakamoto, Jessica Schembri, Jitendra Sharma, Atsushi Takahashi, Tsephel Thangpey, Ning Wang, Qiangge Zhang, Guoping Feng, Fenna Krienen (2024) Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from marmoset brain [Dataset]. Available from: https://assets.nemoarchive.org/col-vdk0cmw.