NeMO Identifier: Collection

NeMO ID: nemo:col-iywcuxg

  • Collection Name: BICAN__MetaSnapshot__2025-08-12__HMBA__aibs__nuclei__10X_genomics_multiome__naked_mole-rat__demultiplexed_fastq__coh-8boto7m__no_restriction
  • Short Name: BICAN__MetaSnapshot__2025-08-12__HMBA__aibs__nuclei__10X_genomics_multiome__naked_mole-rat__demultiplexed_fastq__coh-8boto7m__no_restriction
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: naked mole-rat
  • Assays: multiome; chromatin , multiome; transcriptome
  • Anatomical Regions: entorhinal cortex , primary visual cortex (striate cortex, area V1/17)
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords:
  • Contact:
  • Grant Numbers: UM1MH130981
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open

Project(s) this Collection Belongs To

ID Title
nemo:prj-t8d9ty5 Functionally guided adult whole brain cell atlas in human and NHP

Brain Region(s) of Interest

Name
entorhinal cortex
primary visual cortex (striate cortex, area V1/17)

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-dyd3qme BICAN__MetaCumulative__2025-08-12__HMBA__aibs__nuclei__10X_genomics_multiome__naked_mole-rat__demultiplexed_fastq__coh-8boto7m__no_restriction collection
nemo:col-gnbwm7e BICAN-2025-09-RR-SCO collection BICAN-2025-09-RR-SCO

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-kw9402f BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_ATACseq__naked_mole-rat__demultiplexed_fastq__coh-8boto7m__no_restriction files BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_ATACseq__naked_mole-rat__demultiplexed_fastq__coh-8boto7m__no_restriction
nemo:col-xpzx8qz BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_RNAseq__naked_mole-rat__demultiplexed_fastq__coh-8boto7m__no_restriction files BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_RNAseq__naked_mole-rat__demultiplexed_fastq__coh-8boto7m__no_restriction

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473