Single nucleus transcriptomic profiling of mouse locus coeruleus norepinephrine neurons with projections to frontal cortex, cerebellum and spinal cord - fastq (Cumulative)

Program
bican
Collection Type
Dynamic
Keywords
Rapid Release

As part of the BRAIN Initiative Cell Atlas Network, transcriptomic atlas of Mus musculus locus coeruleus norepinephrine neurons generated using retrograde labeling with injections targeting frontal cortex, cerebellum or spinal cord, followed by FACS sorting of fluorescently labeled nuclei and SMART-seq V4 sequencing. This dataset is part of spatio-molecular profiling of locus coeruleus and sub-coeruleus norepinephrine neuronal populations - fastq (Cumulative)

Data citation
No data citation listed
Funding agency
NIMH
Grant numbers
R01MH134833
Access
open
License
CCBY4

Download URLs

  • Browse HTTP server https://data.nemoarchive.org/bican/grant/BICAN_Neuromodulation/aibs/transcriptome/nuclei/SSv4/house_mouse/demultiplexed_fastq
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Anatomical Regions

  • Locus ceruleus

Taxa

house mouse

Projects this collection belongs to

  • Structure-function cell atlas for norepinephrine and serotonin neurons

Assays, Modalities & Techniques

Assays
transcriptome
Modalities
transcriptome
Techniques
smart-seq v4

Child collections

  • Single nucleus transcriptomic profiling of mouse locus coeruleus norepinephrine neurons with projections to frontal cortex, cerebellum and spinal cord - fastq (BICAN-2026-09-RR-SCO Snapshot)

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Contributors

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Documentation & resources