BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_ATACseq__pig-tailed_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction

Program
bican
Collection Type
Static

This collection contains pig-tailed macaque demultiplexed_fastq files from the project HMBA. Files in this collection include 10xMultiome_ATACseq data from nuclei.

Data citation
Dataset: Trygve Bakken, Rebecca Hodge, Aaron Garcia, Matthew Schmitz, Morgan Wirthlin, Beagan Nguy, Anish Bhaswanth Chakka, Jeff Goldy, Rushil Chakrabarty, Michael Tieu, Darren Bertagnolli, Kimberly A. Smith, Amy Torkelson, Katelyn James, Junitta Guzman, Rebecca Ferrer, Trangthanh Pham, Tamara Casper, Windy Ho, Cassandra Sobieski, Boaz P. Levi, Nadiya V. Shapovalova, Daniel Hirschstein, Nicholas Peña, Danielle L. Jones, Lauren Kruse, Jessie Puckett, Hongkui Zeng, Ed Lein (2024) Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from pig-tailed macaque brain [Dataset]. Available from: https://assets.nemoarchive.org/col-8shaeh2.
Funding agency
NIMH
Grant numbers
UM1MH130981
Access
open
License
No license listed

Download URLs

No download URLs listed for this collection.

Anatomical Regions

  • substantia nigra
  • head of caudate
  • rostral putamen
  • tail of caudate
  • caudal putamen
  • subthalamic nucleus

Taxa

pig-tailed macaque

Projects this collection belongs to

  • nemo:prj-t8d9ty5
    Functionally guided adult whole brain cell atlas in human and NHP

Assays, Modalities & Techniques

Assays
multiome; chromatin
Modalities
multimodal
Techniques
10X genomics multiome;atac-seq

Child collections

No child collections listed for BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_ATACseq__pig-tailed_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction collection.

Parent collections

  • nemo:col-8shaeh2
    BICAN__MetaSnapshot__2025-08-12__HMBA__aibs__nuclei__10X_genomics_multiome__pig-tailed_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction
    collection

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_ATACseq__pig-tailed_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources