NeMO Identifier: Collection

NeMO ID: nemo:col-8shaeh2

  • Collection Name: BICAN__MetaSnapshot__2025-08-12__HMBA__aibs__nuclei__10X_genomics_multiome__pig-tailed_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction
  • Short Name: BICAN__MetaSnapshot__2025-08-12__HMBA__aibs__nuclei__10X_genomics_multiome__pig-tailed_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: pig-tailed macaque
  • Assays: multiome; chromatin , multiome; transcriptome
  • Anatomical Regions: head of caudate , tail of caudate , caudal putamen , posteroventral putamen , substantia nigra , rostral putamen , subthalamic nucleus , nucleus accumbens , spinal cord , external segment of globus pallidus , body of caudate , internal segment of globus pallidus
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords:
  • Contact:
  • Grant Numbers: UM1MH130981
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open

Project(s) this Collection Belongs To

ID Title
nemo:prj-t8d9ty5 Functionally guided adult whole brain cell atlas in human and NHP

Brain Region(s) of Interest

Name
head of caudate
tail of caudate
caudal putamen
posteroventral putamen
substantia nigra
rostral putamen
subthalamic nucleus
nucleus accumbens
spinal cord
external segment of globus pallidus
body of caudate
internal segment of globus pallidus

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-62cuyfa BICAN__MetaCumulative__2025-08-12__HMBA__aibs__nuclei__10X_genomics_multiome__pig-tailed_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction collection
nemo:col-gnbwm7e BICAN-2025-09-RR-SCO collection BICAN-2025-09-RR-SCO

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-q2n8xrh BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_ATACseq__pig-tailed_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction files BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_ATACseq__pig-tailed_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction
nemo:col-8mtxhhy BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_RNAseq__pig-tailed_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction files BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_RNAseq__pig-tailed_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473