NeMO Identifier: Collection

NeMO ID: nemo:col-tvfhknr

  • Collection Name: Developing Mouse Brain Atlas: RNAseq of single cells from embryonic and postnatal mouse brain (10X v3.1 HT) (Cumulative)
  • Short Name: zeng_10Xv3.1-HT_mouse_cells (Cumulative)
  • Programs: bican

COLLECTION METADATA

  • Description:

  • As part of the BRAIN Initiative Cell Atlas Network, single cells from mouse were assayed by 10X chromium 3' v3.1 HT sequencing.

  • Collection Type: Dynamic
  • Taxa: house mouse
  • Assays: HT; transcriptome
  • Anatomical Regions: Hindbrain , Hippocampal formation , Cerebral nuclei , Olfactory areas , Isocortex , Cerebellum , Hypothalamus , Midbrain , Thalamus , Cortical subplate
  • Modalities: transcriptome
  • Techniques: 10xV3.1_HT
  • Specimen Type:
  • Keywords: BICAN , Rapid Release
  • Contact:
  • Grant Numbers: U01MH130962
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open

Project(s) this Collection Belongs To

ID Title
nemo:prj-ggc1k9k Comprehensive single-cell atlas of the developing mouse brain

Brain Region(s) of Interest

Name
Hindbrain
Hippocampal formation
Cerebral nuclei
Olfactory areas
Isocortex
Cerebellum
Hypothalamus
Midbrain
Thalamus
Cortical subplate

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-8a0zzpw Developing Mouse Brain Atlas: RNAseq of single cells from embryonic and postnatal mouse brain (10X v3.1 HT) (BICAN-2024-09-RR-SCO Snapshot) files zeng_10Xv3.1-HT_mouse_cells (BICAN-2024-09-RR-SCO Snapshot) ongoing
nemo:col-9v0xd24 Developing Mouse Brain Atlas: RNAseq of single cells from embryonic and postnatal mouse brain (10X v3.1 HT) (BICAN-2026-01-RR-SCO Snapshot) files zeng_10Xv3.1-HT_mouse_cells (BICAN-2026-01-RR-SCO Snapshot)

Documentation