Human and Mammalian Brain Atlas: Single nucleus RNA-seq from human brain (10X v4) - processed (BICAN-2026-09-RR-SCO Snapshot)

Program
bican
Collection Type
Static
Specimen Type
nuclei
Keywords
Rapid Release 2026

As part of the BRAIN Initiative Cell Atlas Network, single nuclei from human brain were assayed using 10X v4 sequencing - processed (BICAN-2026-09-RR-SCO Snapshot)

Data citation
Dataset (processed): Beagan Nguy, Anish Bhaswanth Chakka, Jeff Goldy, Rushil Chakrabarty, Michael Tieu, Darren Bertagnolli, Kimberly A. Smith, Amy Torkelson, Katelyn James, Junitta Guzman, Rebecca Ferrer, Trangthanh Pham, Nick Dee, Tamara Casper, Michael Clark, Jessica Gloe, Rachel McCue, Windy Ho, Alex Tran, Elliot Phillips, Madhav Kannan, Dan Yuan, Alvin Huang, Matthew Jungert, Kathryn Jordan, Rebecca Hodge, Aaron Garcia, Cassandra Sobieski, Boaz P. Levi, Nadiya V. Shapovalova, Daniel Hirschstein, Nicholas Peña, Danielle L. Jones, Lauren Kruse, Inkar Kapen, Trygve Bakken, Nelson Johansen, Yuanyuan Fu, Zizhen Yao, Changkyu Lee, Ed Lein, Hongkui Zeng (2026) Human and Mammalian Brain Atlas: Single nucleus RNA-seq from human brain (10X v4) [Dataset - processed]. Available from: https://assets.nemoarchive.org/nemo:col-x24wq9f
Funding agency
NIMH
Grant numbers
UM1MH130981
Access
open
License
BICAN-BY-NR

Download URLs

  • Download BDBag https://data.nemoarchive.org/bdbags/BICAN/BICAN-2026-09-RR-SCO/col-x24wq9f__BICAN__Snapshot__2026-09-25__HMBA__aibs__nuclei__10x_v4__human__processed__open__no_restriction.tgz 44 files 491.95 GB
    Processed BDBag

Anatomical Regions

  • lateral hemisphere, posterior lobe portion
  • granular cell layer of CBLPs
  • molecular layer of PVA

Taxa

human

Projects this collection belongs to

  • nemo:prj-t8d9ty5
    Functionally guided adult whole brain cell atlas in human and NHP

Assays, Modalities & Techniques

Assays
transcriptome
Modalities
transcriptome
Techniques
10x Chromium 3' v4 sequencing

Child collections

No child collections listed for Human and Mammalian Brain Atlas: Single nucleus RNA-seq from human brain (10X v4) - processed (BICAN-2026-09-RR-SCO Snapshot) collection.

Parent collections

  • nemo:col-7r3cw94
    Human and Mammalian Brain Atlas: Single nucleus RNA-seq from human brain (10X v4) - processed (Cumulative)
    collection
  • nemo:col-i17zvqh
    BICAN Rapid Release Inventory: Single cell transcriptomics and epigenomics (BICAN-2026-09-RR-SCO)
    collection

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for Human and Mammalian Brain Atlas: Single nucleus RNA-seq from human brain (10X v4) - processed (BICAN-2026-09-RR-SCO Snapshot) collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources