Developing Mouse Brain Atlas: RNAseq analysis of single cells from developing mouse brain - processed (BICAN-2026-09-RR-SCO Snapshot)

Program
bican
Collection Type
Static
Specimen Type
cells
Keywords
Rapid Release 2026

As part of the BRAIN Initiative Cell Atlas Network, single cells from mouse were assayed by 10X chromium 3' v3.1 sequencing - processed (BICAN-2026-09-RR-SCO Snapshot)

Data citation
Dataset (processed): Guohua Yuan, Matthew G. Keefe, Marilyn Steyert, Tomasz J. Nowakowski (2026) Developing Mouse Brain Atlas: RNAseq analysis of single cells from developing mouse [Dataset - processed]. Available from: https://assets.nemoarchive.org/nemo:col-xc7v60i
Funding agency
NIMH
Grant numbers
U01MH130962
Access
open
License
CCBY4

Download URLs

  • Download BDBag https://data.nemoarchive.org/bdbags/BICAN/BICAN-2026-09-RR-SCO/col-xc7v60i__BICAN__Snapshot__2026-09-25__BICAN_Dev_Mouse__ucsf_nowakowski__cells__10x_v3.1__house_mouse__processed__open__no_restriction.tgz 135 files 363.90 GB
    Processed BDBag

Anatomical Regions

  • Isocortex
  • Thalamus

Taxa

house mouse

Projects this collection belongs to

  • nemo:prj-ggc1k9k
    Comprehensive single-cell atlas of the developing mouse brain

Assays, Modalities & Techniques

Assays
transcriptome
Modalities
transcriptome
Techniques
10x chromium 3' v3.1 sequencing

Child collections

No child collections listed for Developing Mouse Brain Atlas: RNAseq analysis of single cells from developing mouse brain - processed (BICAN-2026-09-RR-SCO Snapshot) collection.

Parent collections

  • nemo:col-kwjbrf9
    Developing Mouse Brain Atlas: RNAseq analysis of single cells from developing mouse brain - processed (Cumulative)
    collection
  • nemo:col-i17zvqh
    BICAN Rapid Release Inventory: Single cell transcriptomics and epigenomics (BICAN-2026-09-RR-SCO)
    collection

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for Developing Mouse Brain Atlas: RNAseq analysis of single cells from developing mouse brain - processed (BICAN-2026-09-RR-SCO Snapshot) collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources