NeMO Identifier: Collection

NeMO ID: nemo:dat-aqicdbo

  • Collection Name: Molecular zonation of the human striatum across cell types and people
  • Short Name:
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: human
  • Assays: transcriptome , spatial transcriptome
  • Anatomical Regions: striatum
  • Modalities: transcriptome , multimodal
  • Techniques: 10x Chromium 3' v4 sequencing , 10x chromium 5' v3 sequencing , Slide-tag std 10x 5' v2 sequencing
  • Specimen Type:
  • Keywords: Basal Ganglia , Striatum , Spatial transcriptomics , Brain Health , Aging
  • Contact:
  • Grant Numbers: UM1MH130966
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open
  • Data License: CC BY 4.0

Data associated with this Publication

DOI Year PubMed ID Journal Vol:Page

Contributors

Name Organization ORCID
Andrew Kraft
Matthew Lee Broad Institute
Nirmala Rayan
Julianna Milidantri
Haoyuan Gao
Charles Vanderburg
Karol Balderrama
Naeem Nadaf
Vipin Kumar
Katelyn Flowers Broad Institute
Emily Finn
Matthew Shabet
Ezra Muratoglu
Olivia Yoo
Khalid Shakir
Lucas Reese
James Nemesh
Steven Burger Broad Institute
Sadie Drouin
Olivia Catalini
Nikita Budnik
Fei Chen Broad Institute
Steven McCarroll Harvard University ORCID iD icon 0000-0002-6954-8184
Kiku Ichihara
Evan Macosko Broad Institute ORCID iD icon 0000-0002-2794-5165

Project(s) this Collection Belongs To

ID Title
nemo:prj-hqeuy8h An Atlas of Human Brain Cell Variation

Brain Region(s) of Interest

Name
striatum

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-n6b0x7w BICAN Basal Ganglia package collection BICAN Basal Ganglia package ongoing

Documentation