NeMO Identifier: Collection

NeMO ID: nemo:dat-kkuxhz4

  • Collection Name: "An integrated spatial, transcriptomic, and regulatory atlas of the marmoset subcortex"
  • Short Name:
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: white-tufted-ear marmoset
  • Assays: multiome; chromatin , multiome; transcriptome
  • Anatomical Regions: cerebral subcortex
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords: multiomics , subcortex , primate
  • Contact: Fenna Krienen
  • Grant Numbers: UM1MH130981
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open
  • Data License: CC BY 4.0

Data associated with this Publication

DOI Year PubMed ID Journal Vol:Page

Contributors

Name Organization ORCID
Shu Dan
Meghan A Turner
Michael DeBerardine
Victor E Nieto Caballero
Lakme Caceres
Jessica Schembri
Reilly Nakamoto
Qiangge Zhang
Kirsten Levandowski
Burke Q Rosen
Delissa A McMillen
Naomi Martin
Nasmil Valera Cuevas
Paul Olsen
Josh Nagra
Jazmin Campos
Marshall M VanNess
Jack Waters
Shea Ransford
Zoe Juneau
Sam Hastings
Tim Coalson
John Harwell
Takuya Hayashi
David Van Essen
Guoping Feng McGovern Institute for Brain Research 0000-0002-8021-277X
Hongkui Zeng Allen Institute 0000-0002-0326-5878
Ed Lein Allen Institute 0000-0001-9012-6552
Boudewijn Lelieveldt
Brian Long
Fenna M Krienen Harvard University 0000-0002-1400-6820
Fenna Krienen Harvard University 0000-0002-1400-6820

Project(s) this Collection Belongs To

ID Title
nemo:prj-t8d9ty5 Functionally guided adult whole brain cell atlas in human and NHP

Brain Region(s) of Interest

Name
cerebral subcortex

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-n6b0x7w BICAN Basal Ganglia package collection BICAN Basal Ganglia package ongoing

Documentation