NeMO Identifier: Collection

NeMO ID: nemo:dat-sd7edj9

  • Collection Name: A Multiomic (RNA + ATAC) Atlas of Human Basal Ganglia and Cortical Development from Mid-Gestation Through Early Infancy
  • Short Name:
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: human
  • Assays: multiome; chromatin , multiome; transcriptome
  • Anatomical Regions: basal nuclei (basal ganglia) , cerebral cortex
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords: Basal Ganglia , human development , neural progenitors , single-cell multiome
  • Contact:
  • Grant Numbers: U01MH130995
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open

Contributors

Name Organization ORCID
Gaurav Singh Rathore
Oier Pastor-Alonso 0000-0001-8075-1768
Abbey Green
Mohammad Baig
Rayyan G Irfan
Selina Li
I-ling Lu
Jaeyeon Kim
Jason Ernst
Eran A Mukamel University of California, San Diego 0000-0003-3203-9535
Chongyuan Luo University of California, Los Angeles
Mercedes F Paredes

Project(s) this Collection Belongs To

ID Title
nemo:prj-vwtwc3r Spatiotemporal epigenomic and chromosomal architectural cell atlas of developing human brains

Brain Region(s) of Interest

Name
basal nuclei (basal ganglia)
cerebral cortex

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-n6b0x7w BICAN Basal Ganglia package collection BICAN Basal Ganglia package ongoing

Documentation