NeMO Identifier: Collection

NeMO ID: nemo:col-p9d5w39

  • Collection Name: Topographic structure and function of locus coeruleus norepinephrine neurons
  • Short Name:
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: house mouse
  • Assays:
  • Anatomical Regions: locus coeruleus
  • Modalities: transcriptome , multimodal
  • Techniques: smart-seq v4 , 10x Chromium 3' v4 sequencing , SMARTSeqSC
  • Specimen Type:
  • Keywords: locus coeruleus , norepinephrine , transcriptomics , Patch-seq , neuromodulation
  • Contact: Yoh Isogai ORCID iD icon , Jeremiah Cohen ORCID iD icon
  • Grant Numbers: R01MH134833
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open
  • Submission Status: Complete

Data associated with this Publication

DOI Year PubMed ID Journal Vol:Page
DOI 2026 41993290

Contributors

Name Organization ORCID
Zhixiao Su Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-0138-7433
Polina Kosillo Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-1944-9460
Kanghoon Jung Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-5381-5161
Shuonan Chen Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-2673-3558
Mathew Summers Allen Institute, Neural Dynamics ORCID iD icon 0009-0002-3409-7384
Alex Piet Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-6529-1414
Han Hou Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-4590-7891
Kenta Hagihara Allen Institute, Neural Dynamics ORCID iD icon 0000-0003-0064-0852
Drew Friedmann Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-2138-8177
Olivia Ho-Shing Allen Institute, Neural Dynamics ORCID iD icon 0009-0006-5525-1829
Matthew I Becker Allen Institute, Neural Dynamics ORCID iD icon 0009-0003-9634-4069
Thomas Chartrand Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-7093-8681
Peter Grotz Allen Institute, Neural Dynamics ORCID iD icon 0009-0001-4610-4759
Ella Hilton-VanOsdall Allen Institute, Neural Dynamics ORCID iD icon 0009-0000-0325-9470
Margaret Lee Allen Institute, Neural Dynamics ORCID iD icon 0009-0002-1245-5363
Rajvi Javeri Allen Institute, Neural Dynamics
Samantha L Tuggle Allen Institute, Neural Dynamics ORCID iD icon 0000-0003-1442-8238
Naveen Ouellette Allen Institute, Neural Dynamics ORCID iD icon 0009-0005-4472-0880
Holly Myers Allen Institute, Neural Dynamics ORCID iD icon 0009-0001-2156-6471
Camilo Laiton Allen Institute, Neural Dynamics ORCID iD icon 0000-0001-8488-8753
Kaelin Wulf Allen Institute, Neural Dynamics ORCID iD icon 0009-0008-8394-8900
John Rohde Allen Institute, Neural Dynamics
Alessio P Buccino
Cameron Arshadi Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-1885-080X
Di Wang Allen Institute, Neural Dynamics
Sharmishtaa Seshamani Allen Institute, Neural Dynamics ORCID iD icon 0000-0001-7289-3184
Sonya Vasquez Allen Institute, Neural Dynamics ORCID iD icon 0009-0004-4202-0461
Carolyn M Eng Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-1081-6463
Douglas R Ollerenshaw Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-3692-1835
Nick Dee Allen Institute, Brain Science ORCID iD icon 0000-0002-2831-9254
Tamara Casper Allen Institute, Brain Science ORCID iD icon 0000-0003-1638-3651
Windy Ho Allen Institute, Brain Science ORCID iD icon 0000-0001-6200-9906
Matthew Jungert Allen Institute, Brain Science ORCID iD icon 0009-0007-6600-9250
Atlas Jordan Allen Institute, Brain Science ORCID iD icon 0009-0006-5527-0608
Elliot Phillips Allen Institute, Brain Science ORCID iD icon 0009-0008-2762-6608
Anish Bhaswanth Chakka Allen Institute, Brain Science ORCID iD icon 0000-0002-1095-1817
Kamiliam Nasirova Allen Institute, Brain Science ORCID iD icon 0009-0001-4672-5045
Krista Blake Allen Institute, Brain Science ORCID iD icon 0009-0000-5703-5499
Audrey McCutcheon Allen Institute, Brain Science ORCID iD icon 0009-0005-7073-0732
Megan Koch Allen Institute, Brain Science ORCID iD icon 0009-0008-8271-8572
Maria Camila Vergara Allen Institute, Brain Science ORCID iD icon 0009-0009-8026-8296
Kimberly A Smith Allen Institute, Brain Science ORCID iD icon 0000-0002-3142-1970
Tim Jarsky Allen Institute, Brain Science ORCID iD icon 0000-0002-4399-539X
Nicholas A Lusk
Mara Rue Allen Institute, Brain Science ORCID iD icon 0000-0002-4305-7838
Xiaoyin Chen Allen Institute, Brain Science ORCID iD icon 0000-0002-2807-6125
Joshua Siegle Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-7736-4844
Adam K Glaser Allen Institute, Neural Dynamics ORCID iD icon 0000-0003-3558-8994
Brian R Lee Allen Institute, Brain Science ORCID iD icon 0000-0002-3210-5638
Karel Svoboda Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-6670-7362
Yoh Isogai Allen Institute, Neural Dynamics ORCID iD icon 0000-0001-7285-1603
Jayaram Chandrashekar Allen Institute, Neural Dynamics ORCID iD icon 0000-0001-6412-0114
Jeremiah Cohen Allen Institute, Neural Dynamics ORCID iD icon 0000-0002-4768-7124

Project(s) this Collection Belongs To

ID Title
nemo:prj-pv9uoga Structure-function cell atlas for norepinephrine and serotonin neurons

Brain Region(s) of Interest

Name
locus coeruleus

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-0p3tt32 Single nucleus transcriptomic profiling of mouse locus coeruleus norephinephrine neurons (Raw) files cohen_lcne_sn_RNAseq (Raw)
nemo:col-3qj1ect Single nucleus transcriptomic profiling of mouse locus coeruleus norepinephrine neurons with projections to frontal cortex, cerebellum and spinal cord (Raw) files cohen_lcne_RetroSeq (Raw)
nemo:col-s96tk9a Patch-seq profiling of mouse locus coeruleus norephinephrine neurons (Raw) files cohen_lcne_pseq_t (Raw) complete
nemo:col-qocsrc5 Single nucleus transcriptomic profiling of mouse locus coeruleus norephinephrine neurons (Analysis) files cohen_lcne_sn_RNAseq (Analysis)
nemo:col-afgz110 "Single nucleus transcriptomic profiling of mouse locus coeruleus norepinephrine neurons with projections to frontal cortex, cerebellum and spinal cord (Analysis)" files cohen_lcne_RetroSeq (Analysis)

Documentation