Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain (General research use) (BICAN-2026-01-RR-SCO Snapshot)

Program
bican
Collection Type
Static
Specimen Type
nuclei
Keywords
Rapid Release 2026

As part of the BRAIN Initiative Cell Atlas Network, single nuclei from human brains were assayed using snm3C-seq. Restricted to general research use. (BICAN-2026-01-RR-SCO Snapshot)

Data citation
Dataset: Matthew G Heffel, Heng Xu, Oier Pastor Alonso, Xinzhe Li, Runjia Li, Yi Zhang, Joonho Kum, Min-Jen Tsai, Zachary von Behren, Eleazar Eskin, Bogdan Pasaniuc, Jason Ernst, Bogdan Bintu, Quan Zhu, Eran Mukamel, Mercedes F Paredes, Chongyuan Luo (2026) Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain (General research use) [Dataset]. Available from: https://assets.nemoarchive.org/nemo:col-86wekaq
Funding agency
NIMH
Grant numbers
U01MH130995
Access
restricted
License
No license listed

Download URLs

  • Download BDBag https://data.nemoarchive.org/bdbags/BICAN/BICAN-2026-01-RR-SCO/col-86wekaq__BICAN__Snapshot__2026-01-15__BICAN_Dev_Multiomics__ucla_luo__nuclei__m3C-seq__human__demultiplexed_fastq__coh-sr6qg7f__general_research_use.tgz 1,920 files 6,453.03 GB
    Raw BDBag

Anatomical Regions

  • medial ganglionic eminence
  • caudate nucleus
  • amygdaloid complex
  • cingulate neocortex
  • frontal neocortex
  • temporal neocortex

Taxa

human

Projects this collection belongs to

  • nemo:prj-vwtwc3r
    Spatiotemporal epigenomic and chromosomal architectural cell atlas of developing human brains

Assays, Modalities & Techniques

Assays
methylation
Modalities
epigenome
Techniques
m3c-seq

Child collections

No child collections listed for Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain (General research use) (BICAN-2026-01-RR-SCO Snapshot) collection.

Parent collections

  • nemo:col-x51zebe
    Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain (General research use) (Cumulative)
    collection
  • nemo:col-ow59b0f
    BICAN Rapid Release Inventory: Single cell transcriptomics and epigenomics (BICAN-2026-01-RR-SCO)
    collection
  • nemo:col-i17zvqh
    BICAN-2026-09-RR-SCO
    collection

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain (General research use) (BICAN-2026-01-RR-SCO Snapshot) collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources